Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq35027 179 9e-43 seq12411 131 4e-28 seq54146 116 9e-24 seq20762 80.6 6e-13 >seq35027 Length=337 Score = 179 bits (198), Expect = 9e-43 Identities = 141/169 (83%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| || ||| ||||||| |||| || |||||||||||| |||||| ||||| ||| Sbjct 337 CCCCGTTATATTTTCGGCGCAAAATCGCTAGACCAGTGAGCTGTTACGCTTTCTTTAAAG 278 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| |||||||||||||||||||| |||||| ||||||||| ||||| Sbjct 277 GGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCACAGCAACTTTACATCCTTTTCCACTT 218 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || ||| |||||||| ||||||||| | |||||| |||| |||||||| Sbjct 217 AGACACGACTTAGGGACCTTAGCTGCTAGTCTGGGTTGTTCCCCTCTCG 169 >seq12411 Length=1650 Score = 131 bits (144), Expect = 4e-28 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 258 ACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCT 317 ||| ||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||||| Sbjct 774 ACTCGACTAGTGAGCTATTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCT 833 Query 318 GGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGA 377 | ||||| || ||||||| |||||||||||| | || ||| ||||||||| Sbjct 834 AGCTGTCTGTGCCTTCCCACATCGTTTCCCACTGAGCTGTGATTTTGGGACCTTAGCTGG 893 Query 378 TGATCTGGGCTGTTTCCCTCTC 399 | |||||| ||||||||| || Sbjct 894 CGGTCTGGGTTGTTTCCCTTTC 915 Score = 73.4 bits (80), Expect = 9e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||| |||| | || || | | | | Sbjct 512 CGACTACGCATCTCTGCCTCGCCTTAGGGGCCGACTAACCCTGCGCCGATTAGCGTTGCG 571 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCG 100 | |||| |||||| | |||||||||||| || |||||| Sbjct 572 CAGGAAACCTTGGGTTTTCGGCGGACGGGTTTTTCACCCG 611 >seq54146 Length=223 Score = 116 bits (128), Expect = 9e-24 Identities = 164/224 (73%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 109 TACTCATGCCTGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCAC 168 |||||||| | |||||| |||| | | ||||| || || || | || ||||| Sbjct 221 TACTCATGTCAGCATTCGCACTTGTGATACCTCCAGCAAACT-TCTCAATTCACCTTCAA 163 Query 169 CA-CTGACACGACGCTCCCCTACCC---AACCACACAGGTTG---CCACAGCTTCGGCGG 221 | || |||| ||||||||||||| || | | || || || ||||||||| | Sbjct 162 CGGCTTACACAACGCTCCCCTACCACTTAATCCTA-AGATTAAATCCGCAGCTTCGGTGA 104 Query 222 ATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCA 281 || ||| |||||| ||||| || |||| || ||| ||| ||||||||||||||| Sbjct 103 CTAGTTTA-GCCCCGTTACATCTTCCGCGCAGACCGACTCGACTAGTGAGCTATTACGCT 45 Query 282 CTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 ||||| ||||||||||||||| ||||||||||||| | ||||| Sbjct 44 TTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTAGCTGTCT 1 >seq20762 Length=540 Score = 80.6 bits (88), Expect = 6e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 |||||||||||||| |||||||||||||| ||| || || |||| || ||| |||| Sbjct 540 AGGATGGCTGCTTCTAAGCCAACCTCCTGACTGTTTATGCCTTCCCACTTCGTTTACCAC 481 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | | ||| ||| |||||||||| | |||||| ||||||||| Sbjct 480 TTAACTGTGTCTTTGGGACCTTAGCTGAGGGTCTGGGTTGTTTCCCT 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176898303488