Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq572 370 3e-100 seq574 363 5e-98 seq37 253 6e-65 seq1354 134 4e-29 >seq572 Length=310010 Score = 370 bits (410), Expect = 3e-100 Identities = 345/429 (80%), Gaps = 12/429 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||||| ||||||||| Sbjct 276599 GTACTCATTCCAATTACGGGTCCTCGAAAGAGTCCCGTATTGTTATTTATCGTCACTACC 276658 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 276659 TCCCCGTGCCGGGAATGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 276718 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 276719 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACGACCATGGT 276778 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||| |||||| ||||||| || | ||||||| Sbjct 276779 AGGCACATAATCTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 276838 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGA--GCCCCGAAGGGC 294 | || || |||||| || | ||||| || ||||| || || | ||||| | Sbjct 276839 GCGAGACCGTGCGATCAGCGCAAGGTTATCCAGAGTCACCAAAAGAACGGGCCGAAACCC 276898 Query 295 G-TTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGG-GGTTTTTAGCATGTA 350 | |||| ||| ||||||||| | | | | ||| | ||||| | || | ||||||| Sbjct 276899 GATTGG--TTTGGTCTAATAAAAGCGCTCGTCCCGTAAGGTCGGAGCTTGATTGCATGTA 276956 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||||| |||||||| |||| | ||| ||| || ||| |||||| Sbjct 276957 TTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATAGTAAGATCTAAGGAACCATAACT 277016 Query 411 GATTTAATG 419 ||||||||| Sbjct 277017 GATTTAATG 277025 >seq574 Length=198552 Score = 363 bits (402), Expect = 5e-98 Identities = 354/445 (80%), Gaps = 13/445 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||||| ||||||||| Sbjct 192915 GTACTCATTCCAATTACGGGTCCTCGAAAGAGTCCCGTATTGTTATTTATCGTCACTACC 192974 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 192975 TCCCCGTGCCGGGAATGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 193034 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 193035 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACGACCATGGT 193094 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||| |||||| ||||||| || | ||||||| Sbjct 193095 AGGCACATAATCTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 193154 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGA--GCCCCGAAGGGC 294 | || || |||||| || | ||||| || ||||| || || | ||||| | Sbjct 193155 GCGAGACCGTGCGATCAGCGCAAGGTTATCCAGAGTCACCAAAAGAACGGGCCGAAACCC 193214 Query 295 G-TTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGG-GGTTTTTAGCATGTA 350 | |||| ||| ||||||||| | | | | ||| | ||||| | | | ||||||| Sbjct 193215 GATTGG--TTTGGTCTAATAAAAGCGCTCGTCCCGTAAGGTCGGAGCCTGATTGCATGTA 193272 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||||| |||||||| |||| | ||| ||| || ||| |||||| Sbjct 193273 TTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATAGTAAGATCTAAGGAACCATAACT 193332 Query 411 GATTTAATGAGCCATTCGCAGTTTC 435 |||| |||| | | ||| || |||| Sbjct 193333 GATTCAATG-GTCCTTCACATTTTC 193356 >seq37 Length=978333 Score = 253 bits (280), Expect = 6e-65 Identities = 408/544 (75%), Gaps = 53/544 (10%) Strand=Plus/Minus Query 1 GTACTCATTCCAATT-ACAAGACCCAAAAGAGCCCTGTATCAGT-ATTTATTGTCACTAC 58 ||||||||||||||| || | || ||||| || |||| || |||||| |||||||| Sbjct 300442 GTACTCATTCCAATTCACGGGTCCTCGAAGAGTCCCGTATTTGTTATTTATCGTCACTAC 300383 Query 59 CTCCCCGTGT-CGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC-TTGGATGTGGTAGC 116 || ||| || ||||| ||||||||||||| || ||||||||||| |||||||||||||| Sbjct 300382 ATCGCCGCGTGCGGGAATGGGTAATTTGCGTGC-TGCTGCCTTCCATTGGATGTGGTAGC 300324 Query 117 CGTTTCTC-AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT----GAT 171 |||||||| | ||||||||||||| |||||||||| ||||||| | |||||| | Sbjct 300323 CGTTTCTCAATGCTCCCTCTCCGG-ATCGAACCCTGATTCCCCCGTTCCCGTTACGACAA 300265 Query 172 ACCATGGTAGGC-CACTATCCTACCAT-CGAAAGTTGATAGGGCAGAAATTTGAATGAAC 229 |||||||||||| || |||| |||| |||||||||||| ||||| || |||| || Sbjct 300264 ACCATGGTAGGCACAGTATCTAGCCATCCGAAAGTTGATA-AGCAGACATGTGAAAGATA 300206 Query 230 CATCGCCG--GCTCAAGGC-CATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGA- 282 | |||||| | ||| | | |||||| || | |||| | || ||||| || || Sbjct 300205 CGTCGCCGGTGGCGAAGACGCGTGCGATCAGCGCAAGGTTA--AAGAGTCACCAAAAGAA 300148 Query 283 ---GCCCCGAAGGGCG--TTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAG-- 331 ||| || ||| |||| ||| ||||||||| | | | |||| ||| Sbjct 300147 ACGGCCGTAAACCGCGAATTGG--TTTGGTCTAATAAAATCGCTCGTTCCCGATAAAGGT 300090 Query 332 TCGGGGTTTTTAGCATGT-ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA 390 ||| | || |||||| |||||||||| ||||| ||| |||||||| |||| | ||| Sbjct 300089 CCGGAGCTTGATGCATGTAATTAGCTCTA-AATTATCACAGTTATCCAAGTAG-ATAGTA 300032 Query 391 CTATCAAATAAACGATAACTGAT-TTAATG-AGCCATTCGCAGTTTCACTGTATAGATTG 448 ||| || ||| ||||||||| |||||| ||||| |||| |||||| | | | | Sbjct 300031 -AATCTAAGGAACCATAACTGATCTTAATGAAGCCA-TCGC-GTTTCA-GCTTTGGTATC 299976 Query 449 CTTA---TACTTAGA-CATGCATGGCTTAA-TCTTTGAGA-CAAG-CATATGACTA-CTG 500 | || |||||||| |||||||||||||| ||||||||| |||| |||||||||| ||| Sbjct 299975 CGTACTGTACTTAGATCATGCATGGCTTAACTCTTTGAGAGCAAGCCATATGACTAGCTG 299916 Query 501 GCAG 504 |||| Sbjct 299915 GCAG 299912 Score = 147 bits (162), Expect = 7e-33 Identities = 187/242 (77%), Gaps = 19/242 (8%) Strand=Plus/Minus Query 1 GTACTCATTCC-AATTACAAGACCCA--AAAGAGCCCT--GTATCAGTATTTATTG-TCA 54 ||||||||||| |||||| | || |||||| || |||| ||||||| | ||| Sbjct 301038 GTACTCATTCCGAATTACGGGGTCCTCGAAAGAGTCCGCCGTATTGTTATTTATCGGTCA 300979 Query 55 CTAC-CTCCCCGTGTCGGGATTGGGTAATTTGCGC----GCCTGCTGCCTTCCTTGG-AT 108 ||| ||||||||| ||||| ||||||| || ||| ||||||||| |||||||| || Sbjct 300978 -TACGCTCCCCGTGCCGGGAATGGGTAAGTTTCGCCGTGGCCTGCTGCATTCCTTGGCAT 300920 Query 109 GTGGTA-GCCGTTT-CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCG 166 |||||| ||||||| |||| |||||||||| ||||||| ||| ||||||||||| ||| Sbjct 300919 GTGGTACGCCGTTTTCTCATGCTCCCTCTCGTGAATCGACACCTGATTCCCCGTTAACCG 300860 Query 167 TTGATACCATGGTAGGCCACTATCCTA--CCAT-CGAAAG-TTGATAGGGCAGAAATTTG 222 || |||||||| | || | ||| |||| |||||| ||| || |||||| ||||| Sbjct 300859 TTACGACCATGGTGGCACATAAATCTACGCCATGCGAAAGTTTGCTAAGGCAGACATTTG 300800 Query 223 AA 224 || Sbjct 300799 AA 300798 >seq1354 Length=79999 Score = 134 bits (148), Expect = 4e-29 Identities = 93/104 (89%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct 62392 AACCATAACTGATTTAATGAGCCATTCGCGGTTTCACTTTGTATCCGTCTG-TACTTAGA 62334 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 62333 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 62290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509499997952