Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq47041 109 8e-19 seq35078 107 3e-18 seq32764 84.2 3e-11 >seq47041 Length=258 Score = 109 bits (120), Expect = 8e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 196108 CGGCCACGACAAAGCTGACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCACAGAT 196167 |||| || ||||| ||||| || ||||| || || | || ||||| || Sbjct 240 CGGCACCGTCAAAGAAGACCGCACTGGCACGGGTACAAAATCAGTCTTCGGCTATCAATC 181 Query 196168 GCGCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTC 196227 || | |||||| || || || | | | |||||||| || ||||||||| | ||||| Sbjct 180 ACGTTACGATCTTAGCGAAGGCTTTCAGGTTGTCACCACTAAAAAACTCCATTTACGTTC 121 Query 196228 CATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGA 196287 ||||||||| |||||||| ||||| || || || || ||||| || || ||||| || || Sbjct 120 CATCATTCACGAACTGCTCTGGTTTCTAAAAGGCGATACCAATATTAAATACCTCAAAGA 61 Query 196288 CAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTA 196347 ||||| || |||||| | || ||||| | ||| |||| | || || || || || Sbjct 60 TAACGGCGTGCGCATCTGGGATGAATGGGCAGATGAAAACGGTGATCTTGGACCCGTATA 1 >seq35078 Length=336 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 196167 TGCGCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTT 196226 |||| || |||||| || || || || || || ||||| || ||| ||||||| | Sbjct 268 TGCGTTTTGATCTGAGTGAAGGCTTTCCTCTTGTTACCACTAAAAAATGCCATCTGAAAT 209 Query 196227 CCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATG 196286 | || |||||||||||||| |||||| | | || || || ||||| |||||| || | | Sbjct 208 CGATAATTCATGAACTGCTCTGGTTCTTGAGTGGTGAAACGAACATAAAGTACTTGCAAG 149 Query 196287 ACAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTT 196346 | || ||||| |||||||| |||||||| | ||| || || | ||||| || | Sbjct 148 ATAATGGTGTTCGCATCTGGAATGAGTGGGCTGATGAAGAAGGCAATTTAGGGCCTGTCT 89 Query 196347 ACGGTAAGCAGTGGCGT 196363 |||| | || |||||| Sbjct 88 ACGGCTATCAATGGCGT 72 >seq32764 Length=357 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 3787 ATTTAGGACTG-TAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGT 3845 ||| ||||| | ||||||||||||||||||| | ||||||||||| | |||||||||| Sbjct 8 ATTAAGGACCGGTAGTTCAGCTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGT 67 Query 3846 TCGATTCCCGTCAGTCCTGCCAT 3868 |||| ||||||| | | ||||| Sbjct 68 TCGAATCCCGTCCGGTCCGCCAT 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770967726287640