Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq1383 168 6e-38 seq283 116 3e-22 >seq1383 Length=104272 Score = 168 bits (186), Expect = 6e-38 Identities = 410/616 (67%), Gaps = 15/616 (2%) Strand=Plus/Plus Query 8185 CTTGTAATCGGGCTGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGATTCTTCGCT 8244 || |||||||| | |||| |||||||||||| | |||| || |||||||| || Sbjct 8306 CTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCT 8365 Query 8245 CTTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACAT 8304 | ||||| ||| | || ||||| ||||| || || ||||| || | || ||| | || Sbjct 8366 TTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATAT 8425 Query 8305 TTCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTAAACACAGTTGTTaaaaaa 8364 | || || || ||| || ||||| ||||| || | | | ||| || | || || Sbjct 8426 TATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAG 8485 Query 8365 aTGCTCGATACATCTAATGGACAAGGGTTAGACGTTTACGACTATATCACAATGGCAAAT 8424 ||| | |||| || ||||| || ||| | ||| | | ||| |||| || || Sbjct 8486 ATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAAC 8545 Query 8425 CATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCTTC 8484 || || |||||||| |||||||| || || |||||| || ||| ||||| ||| Sbjct 8546 CACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTC 8605 Query 8485 ACTGTCATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCTTT 8544 ||||| ||||| | ||| | |||| ||| || | | | |||||| |||| ||| Sbjct 8606 ACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTT 8665 Query 8545 GAAAAAAGCTTGATCTATTACAACAACAGAACAGACCTAATGTATGTAAGAGATGGGG-- 8602 | |||| || | |||||||| | ||| | ||| ||||| | || ||||| | Sbjct 8666 AAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATG---ATCAGTGATGGAGAA 8722 Query 8603 ---TTGT-TTTGAACAAAGATGATGACACGCCTGTCTGTTGGAATGGTCAGGCCGGAGGA 8658 || | | ||| ||| ||| | | |||||||||||||| ||| ||||| Sbjct 8723 ACATTATACTCGAAGGAAG--GAT-ATTGG---GTCTGTTGGAATGGACAGCTAGGAGGG 8776 Query 8659 CTAGAGGGGCTGAGACAAAAAGGCTGGAGTATAGTCAACTTACTGGTAATCAAGAGAGAG 8718 || || || || ||||| | || ||||||||| | ||| | || ||| | ||||||| Sbjct 8777 CTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAA 8836 Query 8719 GGTCGAGTCGAGAACACAAGACTGAGCATTCTGGCCCAAGGAGATAATCAAGTCGTTTGC 8778 || | | || || || ||| || |||| |||||||| || || || | || Sbjct 8837 TGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGT 8896 Query 8779 ACTCAATACAAACTCC 8794 ||||| || ||| ||| Sbjct 8897 ACTCACTATAAAATCC 8912 Score = 159 bits (176), Expect = 3e-35 Identities = 235/333 (71%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 8127 TACAAACTGGAAAGAATTCCTAACAGAAGTAAATGACAATGGGCTAGATATGGAGCATCT 8186 ||||||| | ||| ||| || ||| |||| | | ||||| ||| ||| | || Sbjct 21045 TACAAACGTCACAGAGTTCTTAGCAGGAGTAGACAAAAATGGACTAACCCAGGAAGAACT 21104 Query 8187 TGTAATCGGGCTGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGATTCTTCGCTCT 8246 ||||||||| || |||| |||||||| ||| |||||| || ||||| ||| | || Sbjct 21105 TGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCT 21164 Query 8247 TATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATTT 8306 |||||| ||| | || | | ||||| || || || |||||| |||| ||| | | | Sbjct 21165 TATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTA 21224 Query 8307 CGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTAAACACAGTTGTTaaaaaaaT 8366 || || || || || |||||||||||||| || | | |||||| | || ||||| Sbjct 21225 TGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAAT 21284 Query 8367 GCTCGATACATCTAATGGACAAGGGTTAGACGTTTACGACTATATCACAATGGCAAATCA 8426 | | || | ||| | |||||| | | ||| | | |||||||| |||||||| Sbjct 21285 GATAGACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCA 21344 Query 8427 TATAGATTATGAGAAATGGAATAACCATCAAAG 8459 || || |||||||||||||||||||||||||| Sbjct 21345 CATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 104 bits (114), Expect = 2e-18 Identities = 176/254 (69%), Gaps = 12/254 (5%) Strand=Plus/Plus Query 8212 AGAGAAATCAAAAGGATAGGTCGATTCTTCGCTCTTATGTCATGGAAGCTGAGAGATTAC 8271 |||||| |||||| || ||||| ||| | |||| ||| ||| | || | || ||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 8272 TTCGTAATTACAGAATATTTAATTAAATTACATTTCGTCCCTCTCTTCTCCGGATTAACT 8331 || || || || |||||| |||| ||| | | | || || || || || |||||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 8332 ATGGCAGATGATCTAAACACAGTTGTTaaaaaaaTGCTCGATACATCTAATGGACAAGGG 8391 ||||| || || | | ||| || | || |||||| | || | |||| |||||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 8392 TTAGACGTTTACGACTAT------ATCACAATGGCAAATCATATAGATTATGAGAAATGG 8445 | ||| |||||| |||||||| ||||| ||||| || |||||||| ||| Sbjct 38093 CT-CACG-----GACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGG 38146 Query 8446 AATAACCATCAAAG 8459 || ||||||||||| Sbjct 38147 AACAACCATCAAAG 38160 Score = 84.2 bits (92), Expect = 2e-12 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 8410 ATCACAATGGCAAATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCA 8469 |||||||| || || || ||||||||||||||||||||||||||||||||| ||| | Sbjct 7419 ATCACAATCGCCAACCACATAGATTATGAGAAATGGAATAACCATCAAAGATACGAGTCC 7360 Query 8470 AACAATCCTGTCTTCACTGTCATGGG 8495 | | || || |||||||| ||||| Sbjct 7359 ACTGAGCCAGTATTCACTGTGATGGG 7334 >seq283 Length=322283 Score = 116 bits (128), Expect = 3e-22 Identities = 249/363 (69%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 8198 TGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGATT-CTTCGCTCTTATGTCATGG 8256 ||| ||| || ||||||||||||| || || || ||||| |||| |||| |||| ||| Sbjct 271958 TGAAAGGGAAAGAAAGAGAAATCAGAAAGACAGA-CGATTTCTTC--TCTT-TGTCTTGG 272013 Query 8257 AAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATTTCGTCCCTCTC 8316 | |||| || || ||||||||||| || ||| | ||||| | | | || |||||| Sbjct 272014 ACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTCTC 272073 Query 8317 TTCTCCGGATTAACTATGGCAGATGATCTAAACACAGTTGTTaaaaaaaTGCTCGATACA 8376 ||| | | || | ||| |||||| | | ||||||| || |||||| | || | Sbjct 272074 TTC-CATGTTTTGCCATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACAGT 272132 Query 8377 TCTAATGGACAAGGGTTAGACGTTTACGACTATATCACAATGGCAAATCATATAGATTAT 8436 | | |||||||| |||| ||| | || | ||| || || || || ||||| Sbjct 272133 ACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATTAC 272192 Query 8437 GAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCTTCACTGTCATGGGT 8496 || || |||||||| ||||||||| | || || || || || |||| ||| |||||| Sbjct 272193 GAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGGGT 272252 Query 8497 CAGTTTCTAGGATATCCAAGCCTCAT-AACAAGAACACATGAGTTCTTTGAAAAAAGCTT 8555 | || | |||| | | || | || || || ||||| ||||| || ||||||| Sbjct 272253 AAATTCTTTGGATTGGCTAATCTGTTCTACCAG-ACCCATGAATTCTTCCAACAAAGCTT 272311 Query 8556 GAT 8558 || Sbjct 272312 TAT 272314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41801579913232