Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033006.1 Length=11332 Score E Sequences producing significant alignments: (Bits) Value seq1383 120 2e-23 seq283 102 6e-18 >seq1383 Length=104272 Score = 120 bits (132), Expect = 2e-23 Identities = 237/347 (68%), Gaps = 3/347 (1%) Strand=Plus/Plus Query 6357 AGGATTAGACTGGGAAGAATTGATTATAGGATTAAAAGAGAAGGAAAGAGAACTAAAGGA 6416 |||||| | | ||||| || | || ||||||| || |||||||||||| |||| Sbjct 8287 AGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAAT 8346 Query 6417 GGATGGTAGATTCTACTGCCTAATGTCCTGGGCCTTGAGGGAATATTTTGTCGTCACTGA 6476 || ||||||| || | ||||| |||| | || ||||| |||||| |||| || Sbjct 8347 CTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGA 8406 Query 6477 GTATTTGATTAAATTACATTTTATTCCTCTTTTTAAGGGTCTGACTGTCGCTGATGACAT 6536 ||| |||| ||| | ||| | | || ||||| || || | || | || || |||| Sbjct 8407 GTACCTGATCAAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACAT 8466 Query 6537 GACAACACTAATCAAGAAGATGATGGATAATTCTTCAGGACAAGGATTAGATGATTATTC 6596 ||| || | |||||||||||||| |||| || ||||| |||||| ||| || || Sbjct 8467 GACCACCGTGATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTC 8526 Query 6597 CAGAGTTTCTTATGCGAACCATTTAGATTATGAGAAGTGGAATAACTATCAGCG-TATAG 6655 | | | | ||| ||||| | |||||||| || ||||| || | || | ||| | Sbjct 8527 CCAAATCGCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATAT-G 8585 Query 6656 AATCCAACGGGCCTACATTCAGAGTAAT-GGGACAGTTTTTGGGTTA 6701 | || | | ||| ||||| || || |||| | ||||||| ||| Sbjct 8586 ACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTA 8632 >seq283 Length=322283 Score = 102 bits (112), Expect = 6e-18 Identities = 252/374 (67%), Gaps = 10/374 (3%) Strand=Plus/Plus Query 6371 AAGAATTGATTATAGGATTAAAAGAGAAGGAAAGAGAACTAAAGGAGGATGGTAGATT-C 6429 ||||| | || ||| |||| |||| ||| ||||||||| | | | | || | |||| | Sbjct 271940 AAGAACTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCA-GAAAGACAGACGATTTC 271998 Query 6430 TACTGCCTAATGTCCTGGGCCTTGAGGGAATATTTTGTCGTCACTGAGTATTTGATTAAA 6489 | || || |||| ||| |||||||||||||||| || | || |||||| | ||||| Sbjct 271999 TTCT--CTT-TGTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAG 272055 Query 6490 TTACATTTTATTCCTCTTTTTAAGGGTCTGACTGTCGCTGATGACATGACAACACTAATC 6549 | | | | ||||||| || | | | || | | |||||||||||| || | | Sbjct 272056 ATGGAGTATGTTCCTCTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTA 272114 Query 6550 AAGAAGATGATGGATAATTCTTCAGGACAAGGATTAGATGATTATTCCAG--AGTTTCTT 6607 ||||| |||||||| | | | |||||||||| ||||| | || | || ||| Sbjct 272115 AAGAAAATGATGGACAGTACCATAGGACAAGGACTAGATAACTA--CAAGCATGTTGGAA 272172 Query 6608 ATGCGAACCATTTAGATTATGAGAAGTGGAATAACTATCAGCGTATAGAATCCAACGGGC 6667 ||| ||||| | ||||| || || |||||||| |||| | || || | || | Sbjct 272173 TTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAAC 272232 Query 6668 CTACATTCAGAGTAATGGGACAGTTTTTGGGTTATCCTAACCTAATATACAGAACTCATG 6727 | |||| |||||||| | || || || | |||| || | ||| || |||| Sbjct 272233 CAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATG 272292 Query 6728 AATTCTTTCAAAAA 6741 ||||||| ||| || Sbjct 272293 AATTCTTCCAACAA 272306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36122968588928