Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq1383 161 7e-36 >seq1383 Length=104272 Score = 161 bits (178), Expect = 7e-36 Identities = 410/614 (67%), Gaps = 16/614 (3%) Strand=Plus/Plus Query 6208 CTGATCATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCA 6267 ||| | || ||||||||||| || || ||||| | ||| ||||| ||||| | Sbjct 8306 CTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCT 8365 Query 6268 CTTATGTCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACAC 6327 | ||||| |||||| ||||||| || ||||| || |||||||| || |||||| | | Sbjct 8366 TTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATAT 8425 Query 6328 TTTGTACCTCTGTTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAA 6387 | |||||| || |||||||| | |||||||| ||| | |||| || || ||| || Sbjct 8426 TATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAG 8485 Query 6388 ATTTTAGAGAATACAGAGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAAC 6447 || |||| | | |||||| ||| ||| | || | ||| | || | ||| Sbjct 8486 ATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAAC 8545 Query 6448 CATATAGATTACGAGAAATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTTT 6507 || || ||||| || ||||||||||| |||||||| | || | | ||||| || Sbjct 8546 CACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTC 8605 Query 6508 GATGTAATGGGGAAATTCCTTGGCTACCCCAACCTTATCTCACGTACCCATGAAATATT- 6566 ||| ||||||||||| |||| | || ||| | || ||||| ||| | | || Sbjct 8606 ACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTT 8665 Query 6567 -CGAAAAGTCCTGGATGTATTATAATCAGAGGGGAGATTTGATCGGAGTCAATAGAGATG 6625 | ||||| | | ||||| ||| | || || || || || || || |||| Sbjct 8666 AAGGAAAGT--TTAGTTTATTACAATGAAAGACCCGACTTAAT--GA-TC---AGTGATG 8717 Query 6626 GAGTGATATTCAATAAGGATAAAAACAAGAGAGTTTGTTGGATTGGGCAAGAAGGTGGAC 6685 ||| | ||| | | | || | | || ||||||| ||| || ||| || | Sbjct 8718 GAGAAACATTATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGC 8777 Query 6686 TAGAAGGATTGAGACAAAAGGGATGGAGTATCTGTAACCTCCTTGTACTTAGAAGAGAGA 6745 | |||||| | ||||| | || |||||||| | |||||||| |||| ||| ||||||| Sbjct 8778 TCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTAC-TAG-AGAGAGA 8835 Query 6746 GCG---CCTCCGTGAATACTCGGGTCAAAGTATTAGCCCAGGGGGACAACCAGGTGATTA 6802 | | ||| ||||| || || || ||| || || || ||||||||||| || Sbjct 8836 ATGTAAAATACGT-AATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATAT 8894 Query 6803 ATTCTCATTATAAA 6816 | |||| |||||| Sbjct 8895 GTACTCACTATAAA 8908 Score = 113 bits (124), Expect = 3e-21 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 6268 CTTATGTCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACAC 6327 |||| |||||||||| | | || || |||||||| || || ||||| |||||| | || Sbjct 37946 CTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATATCTAATCAAAGAATAC 38005 Query 6328 TTTGTACCTCTGTTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAA 6387 | |||||| ||||| ||||| | || ||||| ||| || |||| ||||| ||| ||| Sbjct 38006 TATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGACCACTGTCATCAAGAAA 38065 Query 6388 ATTTTAGAGAATACAGAGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAAC 6447 || | || | | ||||||| | || | ||| | ||||| | ||||| Sbjct 38066 ATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACAAATCACAATCGCAAAC 38125 Query 6448 CATATAGATTACGAGAAATGGAACAACCACCAAAG 6482 ||||| || || ||||| ||||||||||| ||||| Sbjct 38126 CATATCGACTATGAGAAGTGGAACAACCATCAAAG 38160 Score = 111 bits (122), Expect = 1e-20 Identities = 186/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 6214 ATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTATG 6273 || ||| |||||||||| || ||| | ||| | ||| | || || | |||||| Sbjct 21109 ATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATG 21168 Query 6274 TCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTA 6333 ||||||||| | | | || |||||||| || || ||||| |||||| | ||| |||| Sbjct 21169 TCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTA 21228 Query 6334 CCTCTGTTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTA 6393 || ||||| ||||| | || ||||||||| || |||| || || || ||||| || Sbjct 21229 CCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATA 21288 Query 6394 GAGAATACAGAGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAACCATATA 6453 || | | | | ||||||| || | || | ||||| | |||| || || Sbjct 21289 GACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATT 21348 Query 6454 GATTACGAGAAATGGAACAACCACCAAAG 6482 || || ||||||||||| ||||| ||||| Sbjct 21349 GACTATGAGAAATGGAATAACCATCAAAG 21377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35524969728612