Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_033103.1
Length=13161
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 161 8e-36
>seq1383
Length=104272
Score = 161 bits (178), Expect = 8e-36
Identities = 592/913 (65%), Gaps = 28/913 (3%)
Strand=Plus/Plus
Query 8137 GAGCTTGTCATCGGTCTCAAAGAAAAGGAGCGAGAAATAAAAAAGAAGGGACGGTTTTTC 8196
||||| || ||||| | | || ||||| ||||| |||||| |||| | || |||
Sbjct 8303 GAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTC 8362
Query 8197 TCATTGATGTCCTGGAGTCTTCGAGATTATTTTGTGGTGACTGAGTATTTAATAAAGAAA 8256
|| |||||||| ||| || |||| || ||||| | || ||||| | || || ||
Sbjct 8363 TCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAA 8422
Query 8257 CACTTTGTTCCACTATTCTATGGTCTGACAATGGCCGATGATCTCACGACCGTGATGAGG 8316
| | ||| ||||| ||| | || | |||||||| || | | || |||||||| | |
Sbjct 8423 TATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAG 8482
Query 8317 AAGATGATGGAGAATGCAAATGGACAGGGTCTGGATGATTATAGCTATATTTCTATTGCT 8376
|||||||| || | | |||||||| | ||| || | | || | |||||
Sbjct 8483 AAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCC 8542
Query 8377 AATCACATTGATTATGAGAAGTGGAATAATCACCAACGGTTGGAATCAACCGGACCTGTG 8436
|| ||||| |||||||| || ||||| ||||||||| | | || ||||| | |||||
Sbjct 8543 AACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTA 8602
Query 8437 TTTCGTGTAATGGGACAATTCTTAGGTTATCCA--AATTTGATCTATAGGACACATGAGT 8494
|| ||| ||||| |||| || || | ||| | ||| ||| | |||||| |||
Sbjct 8603 TTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTC--GTACACATCAGT 8660
Query 8495 TCTTTCAACAATCTCTGATCTA---CCATGGAGGTCGAGGGGATTTAATGACAGTCAGAG 8551
| ||| | || | | | || | ||| | | | | | ||||||| |||| |
Sbjct 8661 TTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCG---ACTTAATGA---TCAGTG 8714
Query 8552 ATGG-GAAA-ATTGTGAATTC--AGGATCCACAC-GTGTGTGTTGGGAGGGACAAGCCGG 8606
|||| |||| ||| | | || |||| | | | || |||||| | ||||| ||
Sbjct 8715 ATGGAGAAACATTAT--ACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGG 8772
Query 8607 TGGTCTAGAGGGGCTTAGACAAAAGGGATGGAGTATACTAAACCTGCTAGTAATC-AGAC 8665
|| || || || || ||||| | || ||||||||| ||||||| |||||| | |||
Sbjct 8773 AGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGA- 8831
Query 8666 GCGAAGGTAGTCACCGCAACAC---AAAGATAAAATGCCTGGCCCAGGGAGATAACCAGG 8722
| ||| ||| || || || | || | || |||| || ||||| |||||||
Sbjct 8832 GAGAATGTAAAATACGTAATACCCGAGTGAACACAT---TGGCTCAAGGAGACAACCAGG 8888
Query 8723 TGATCTGCACTCAGTATGAATTACAAAAGTCTCGATCAGATCAGGAAATGGAGGAAAATA 8782
| || || ||||| ||| || | | || | || || | | |||| || |
Sbjct 8889 TTATATGTACTCACTATAAAATCCCAACCGTTAGAACACCTGAAGAAAAAAAGCCCCTCA 8948
Query 8783 TATTGAAAGTTGTACAGAACAATCAGGTAATTTTAGCCAAAATTGAAGAGGGTACAAGGA 8842
|| || | ||||||| | | || | | | | || || |||| ||
Sbjct 8949 TACAAGGAGCGATTCAGAACACAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGA 9008
Query 8843 AATTAGGGCTTATTATCAATAAAGATGAGACCATGCAAAGTGCAGACTATCTAAACTACG 8902
| ||||| | || ||||||||| ||| ||||| ||| ||||| ||| | || || |
Sbjct 9009 AGTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATG 9068
Query 8903 GGAAAGTTCCGGTGGTTAGAGGCAATATAAGAGCGTTAGAGACTAAGCGGTGGGCAAGGG 8962
| ||||| ||| | | ||| ||||| |||| ||||| || | ||||
Sbjct 9069 GCAAAGTACCGATCTTCCAAGGAAATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAA 9128
Query 8963 TGACATGTGTGACAAATGATCAGATACCAACACTTTCAAATGTCATGGCCACAGTTTCCA 9022
|||| |||||||| ||||||||||| | || || |||||| | | |||| || |
Sbjct 9129 TGACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTA 9188
Query 9023 CCAATGCTTTGAC 9035
| ||||| |||||
Sbjct 9189 CAAATGCATTGAC 9201
Score = 109 bits (120), Expect = 5e-20
Identities = 207/305 (68%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 8108 GAGTAGACAAATATGGATTAGATCTGAATGAGCTTGTCATCGGTCTCAAAGAAAAGGAGC 8167
||||||||||| ||||| || | | | || ||||| ||||| || | || ||||||
Sbjct 21071 GAGTAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAA 21130
Query 8168 GAGAAATAAAAAAGAAGGGACGGTTTTTCTCATTGATGTCCTGGAGTCTTCGAGATTATT 8227
||| | |||| ||||| |||||||| | ||||| ||| || || | || |
Sbjct 21131 AGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACT 21190
Query 8228 TTGTGGTGACTGAGTATTTAATAAAGAAACACTTTGTTCCACTATTCTATGGTCTGACAA 8287
||||| | || || ||| |||| || || ||| ||| || || || | || | || |
Sbjct 21191 TTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTA 21250
Query 8288 TGGCCGATGATCTCACGACCGTGATGAGGAAGATGATGGAGAATGCAAATGGACAGGGTC 8347
|||| || || | || || || || | ||| ||||| || | | | | ||| || |
Sbjct 21251 TGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGAC 21310
Query 8348 TGGATGATTATAGCTATATTTCTATTGCTAATCACATTGATTATGAGAAGTGGAATAATC 8407
| ||| || | | || | || || ||||||||||| |||||||| |||||||| |
Sbjct 21311 TCACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACC 21370
Query 8408 ACCAA 8412
| |||
Sbjct 21371 ATCAA 21375
Score = 98.7 bits (108), Expect = 8e-17
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 8829 AGAGGGTACAAGGAAATTAGGGCTTATTATCAATAAAGATGAGACCATGCAAAGTGCAGA 8888
||| || |||| |||| | || || || |||||| | |||||| || ||| |||||
Sbjct 29211 AGAAGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGA 29270
Query 8889 CTATCTAAACTACGGGAAAGTTCCGGTGGTTAGAGGCAATATAAGAGCGTTAGAGACTAA 8948
|| | ||||| ||||||||||| | ||||||| || || | |||| || ||
Sbjct 29271 TTACATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCAA 29330
Query 8949 GCGGTGGGCAAGGGTGACATGTGTGACAAATGATCAGATACCAACACTTTCAAATGTCAT 9008
| | | | || |||| ||||| ||||||||||| || ||| | || |||||||| |
Sbjct 29331 GAGAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGTCCT 29390
Query 9009 GGCCACAGTTTCCACCAATGCTTTGAC 9035
| |||| || ||||| ||||||||
Sbjct 29391 CTCTGCAGTGTCAACCAACGCTTTGAC 29417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41967865267844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |