Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033103.1 Length=13161 Score E Sequences producing significant alignments: (Bits) Value seq1383 161 8e-36 >seq1383 Length=104272 Score = 161 bits (178), Expect = 8e-36 Identities = 592/913 (65%), Gaps = 28/913 (3%) Strand=Plus/Plus Query 8137 GAGCTTGTCATCGGTCTCAAAGAAAAGGAGCGAGAAATAAAAAAGAAGGGACGGTTTTTC 8196 ||||| || ||||| | | || ||||| ||||| |||||| |||| | || ||| Sbjct 8303 GAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTC 8362 Query 8197 TCATTGATGTCCTGGAGTCTTCGAGATTATTTTGTGGTGACTGAGTATTTAATAAAGAAA 8256 || |||||||| ||| || |||| || ||||| | || ||||| | || || || Sbjct 8363 TCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAA 8422 Query 8257 CACTTTGTTCCACTATTCTATGGTCTGACAATGGCCGATGATCTCACGACCGTGATGAGG 8316 | | ||| ||||| ||| | || | |||||||| || | | || |||||||| | | Sbjct 8423 TATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAG 8482 Query 8317 AAGATGATGGAGAATGCAAATGGACAGGGTCTGGATGATTATAGCTATATTTCTATTGCT 8376 |||||||| || | | |||||||| | ||| || | | || | ||||| Sbjct 8483 AAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCC 8542 Query 8377 AATCACATTGATTATGAGAAGTGGAATAATCACCAACGGTTGGAATCAACCGGACCTGTG 8436 || ||||| |||||||| || ||||| ||||||||| | | || ||||| | ||||| Sbjct 8543 AACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTA 8602 Query 8437 TTTCGTGTAATGGGACAATTCTTAGGTTATCCA--AATTTGATCTATAGGACACATGAGT 8494 || ||| ||||| |||| || || | ||| | ||| ||| | |||||| ||| Sbjct 8603 TTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTC--GTACACATCAGT 8660 Query 8495 TCTTTCAACAATCTCTGATCTA---CCATGGAGGTCGAGGGGATTTAATGACAGTCAGAG 8551 | ||| | || | | | || | ||| | | | | | ||||||| |||| | Sbjct 8661 TTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCG---ACTTAATGA---TCAGTG 8714 Query 8552 ATGG-GAAA-ATTGTGAATTC--AGGATCCACAC-GTGTGTGTTGGGAGGGACAAGCCGG 8606 |||| |||| ||| | | || |||| | | | || |||||| | ||||| || Sbjct 8715 ATGGAGAAACATTAT--ACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGG 8772 Query 8607 TGGTCTAGAGGGGCTTAGACAAAAGGGATGGAGTATACTAAACCTGCTAGTAATC-AGAC 8665 || || || || || ||||| | || ||||||||| ||||||| |||||| | ||| Sbjct 8773 AGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGA- 8831 Query 8666 GCGAAGGTAGTCACCGCAACAC---AAAGATAAAATGCCTGGCCCAGGGAGATAACCAGG 8722 | ||| ||| || || || | || | || |||| || ||||| ||||||| Sbjct 8832 GAGAATGTAAAATACGTAATACCCGAGTGAACACAT---TGGCTCAAGGAGACAACCAGG 8888 Query 8723 TGATCTGCACTCAGTATGAATTACAAAAGTCTCGATCAGATCAGGAAATGGAGGAAAATA 8782 | || || ||||| ||| || | | || | || || | | |||| || | Sbjct 8889 TTATATGTACTCACTATAAAATCCCAACCGTTAGAACACCTGAAGAAAAAAAGCCCCTCA 8948 Query 8783 TATTGAAAGTTGTACAGAACAATCAGGTAATTTTAGCCAAAATTGAAGAGGGTACAAGGA 8842 || || | ||||||| | | || | | | | || || |||| || Sbjct 8949 TACAAGGAGCGATTCAGAACACAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGA 9008 Query 8843 AATTAGGGCTTATTATCAATAAAGATGAGACCATGCAAAGTGCAGACTATCTAAACTACG 8902 | ||||| | || ||||||||| ||| ||||| ||| ||||| ||| | || || | Sbjct 9009 AGTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATG 9068 Query 8903 GGAAAGTTCCGGTGGTTAGAGGCAATATAAGAGCGTTAGAGACTAAGCGGTGGGCAAGGG 8962 | ||||| ||| | | ||| ||||| |||| ||||| || | |||| Sbjct 9069 GCAAAGTACCGATCTTCCAAGGAAATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAA 9128 Query 8963 TGACATGTGTGACAAATGATCAGATACCAACACTTTCAAATGTCATGGCCACAGTTTCCA 9022 |||| |||||||| ||||||||||| | || || |||||| | | |||| || | Sbjct 9129 TGACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTA 9188 Query 9023 CCAATGCTTTGAC 9035 | ||||| ||||| Sbjct 9189 CAAATGCATTGAC 9201 Score = 109 bits (120), Expect = 5e-20 Identities = 207/305 (68%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 8108 GAGTAGACAAATATGGATTAGATCTGAATGAGCTTGTCATCGGTCTCAAAGAAAAGGAGC 8167 ||||||||||| ||||| || | | | || ||||| ||||| || | || |||||| Sbjct 21071 GAGTAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAA 21130 Query 8168 GAGAAATAAAAAAGAAGGGACGGTTTTTCTCATTGATGTCCTGGAGTCTTCGAGATTATT 8227 ||| | |||| ||||| |||||||| | ||||| ||| || || | || | Sbjct 21131 AGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACT 21190 Query 8228 TTGTGGTGACTGAGTATTTAATAAAGAAACACTTTGTTCCACTATTCTATGGTCTGACAA 8287 ||||| | || || ||| |||| || || ||| ||| || || || | || | || | Sbjct 21191 TTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTA 21250 Query 8288 TGGCCGATGATCTCACGACCGTGATGAGGAAGATGATGGAGAATGCAAATGGACAGGGTC 8347 |||| || || | || || || || | ||| ||||| || | | | | ||| || | Sbjct 21251 TGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGAC 21310 Query 8348 TGGATGATTATAGCTATATTTCTATTGCTAATCACATTGATTATGAGAAGTGGAATAATC 8407 | ||| || | | || | || || ||||||||||| |||||||| |||||||| | Sbjct 21311 TCACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACC 21370 Query 8408 ACCAA 8412 | ||| Sbjct 21371 ATCAA 21375 Score = 98.7 bits (108), Expect = 8e-17 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 8829 AGAGGGTACAAGGAAATTAGGGCTTATTATCAATAAAGATGAGACCATGCAAAGTGCAGA 8888 ||| || |||| |||| | || || || |||||| | |||||| || ||| ||||| Sbjct 29211 AGAAGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGA 29270 Query 8889 CTATCTAAACTACGGGAAAGTTCCGGTGGTTAGAGGCAATATAAGAGCGTTAGAGACTAA 8948 || | ||||| ||||||||||| | ||||||| || || | |||| || || Sbjct 29271 TTACATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCAA 29330 Query 8949 GCGGTGGGCAAGGGTGACATGTGTGACAAATGATCAGATACCAACACTTTCAAATGTCAT 9008 | | | | || |||| ||||| ||||||||||| || ||| | || |||||||| | Sbjct 29331 GAGAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGTCCT 29390 Query 9009 GGCCACAGTTTCCACCAATGCTTTGAC 9035 | |||| || ||||| |||||||| Sbjct 29391 CTCTGCAGTGTCAACCAACGCTTTGAC 29417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41967865267844