Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033701.1 Length=11743 Score E Sequences producing significant alignments: (Bits) Value seq1383 123 2e-24 >seq1383 Length=104272 Score = 123 bits (136), Expect = 2e-24 Identities = 187/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 6700 CTGGTCATTGGACTGAAGGGAAAAGAGAGAGAAGTTAAAAGGATTGGTCGAtttttttCA 6759 || || || ||||| | | ||| || | ||||| |||| ||| |||||||| || Sbjct 21103 CTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCG 21162 Query 6760 CTAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTT 6819 || ||||||||||||||||| | ||||||||| | |||||||| | || ||| | | Sbjct 21163 CTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATAC 21222 Query 6820 TTTGTACCTTTGTTCTCAGGTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAA 6879 | |||||| |||| ||| ||||| ||||| ||| || | | |||| || |||||| Sbjct 21223 TATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAA 21282 Query 6880 ATGTTGGACCGGGCGACAGGTCAAGGTGAATCTGATTACCAGTATATAACATTTGCAAAT 6939 ||| | ||| | | || ||||| |||| ||| | || ||| | |||||| Sbjct 21283 ATGATAGACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAAT 21342 Query 6940 CATTTTGACTATTCGAAATGGAACAA 6965 || |||||||| ||||||||| || Sbjct 21343 CACATTGACTATGAGAAATGGAATAA 21368 Score = 98.7 bits (108), Expect = 7e-17 Identities = 391/612 (64%), Gaps = 25/612 (4%) Strand=Plus/Plus Query 6690 AGAGAATAGTCTGGTCATTGGACTGAAGGGAAAAGAGAGAGAAGTTAAAAGGATTGGTCG 6749 |||||| || ||||| || ||| | | | || || |||||||| |||| || | Sbjct 8297 AGAGAAGAG-CTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAG 8355 Query 6750 AtttttttCACTAATGTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGAT 6809 ||| || || | ||||| |||||||| || |||||||| | || || ||| |||| Sbjct 8356 ATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGAT 8415 Query 6810 TAAAAAGTTTTTTGTACCTTTGTTCTCAGGTTTAACAATGGCCGAC--GATTACAATTCA 6867 ||| | | || |||||| | ||| ||| ||||||||||| ||| || || | | Sbjct 8416 CAAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCA--CC 8473 Query 6868 GTAATTAAGAAAATGTTGGACCGGGCGACAGGTCAAGGTGAATCTGATTACCAGTATATA 6927 || || ||||| ||| | || | | || || || | |||| ||| | || Sbjct 8474 GTGATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATC 8533 Query 6928 ACATTTGCAAATCATTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAAT 6987 || |||| || || | || ||| |||||||||||| ||| || | | | Sbjct 8534 GCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACA 8593 Query 6988 GACCCAGTCTTCCTTGTCATGGGTAAATTTTTAGGACTACCGAAACTCTTTGTAAGAACC 7047 | ||| || ||| ||| ||||| |||||||| ||| |||| ||| ||| | || Sbjct 8594 GCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACA 8653 Query 7048 CACGAGTTTTTTGAGAAGAGCTGGATTTACTATAACGATCGAGGAGATTTAATTTCTGTG 7107 || |||||||| || | || | |||| || || || || || ||||| Sbjct 8654 CATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAAT------- 8706 Query 7108 CAGGATGATTGCTTGACCAACA--AAACT--GAGAAAAGA------GTTTGTTGGATTGG 7157 ||| | || | || |||| | ||| || || || || ||||||| ||| Sbjct 8707 ---GATCAGTGATGGAGAAACATTATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGG 8763 Query 7158 TCAAAAGGGAGGCCTAGAGGGATTAAGACAAAAAGGATGGAGCATTGTAAGTTTGCTTAT 7217 || ||||| || || ||| | ||||| | || ||||| || ||| | || | Sbjct 8764 ACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGT 8823 Query 7218 GATTGAGAGAGAAAGCAAGATCCGTAATACCCTAATCAAAGTCCTAGCACAAGGAGATAA 7277 | ||||||||| | || || |||||||||| | | || | || |||||||| || Sbjct 8824 ACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAA 8883 Query 7278 TCAAGTGATCTG 7289 || || || || Sbjct 8884 CCAGGTTATATG 8895 Score = 95.1 bits (104), Expect = 9e-16 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 6727 AGAGAAGTTAAAAGGATTGGTCGAtttttttCACTAATGTCTTGGGAACTACGAATGTAC 6786 |||||||| |||| ||| |||||||| || || | ||||||||||||||| |||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6787 TTTGTAGTAACGGAATACTTGATTAAAAAGTTTTTTGTACCTTTGTTCTCAGGTTTAACA 6846 ||||| | |||||||| | || ||| | | | |||||| |||| ||| ||||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6847 ATGGCCGACGATTACAATTCAGTAATTAAGAAAATGTTGGAC 6888 ||||||||| || | | || || ||||||||| | ||| Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGAC 38074 Score = 86.0 bits (94), Expect = 5e-13 Identities = 202/300 (67%), Gaps = 9/300 (3%) Strand=Plus/Plus Query 7261 CTAGCACAAGGAGATAATCAAGTGATCTGCTCATATTATAAGCTTCCAAAAGATCAAACT 7320 ||||| |||||||| |||||||| |||||| || | || ||| |||| || | |||||| Sbjct 29084 CTAGCTCAAGGAGACAATCAAGTCATCTGCACACACTACAAGATTCCCAACGTACAAACT 29143 Query 7321 CACTC---AGCTTGTCGATCAGAGATACCTCATGTCATAGAAAATAATGGGTATATAGTA 7377 || || | | | | ||| | |||| | || ||||| || | Sbjct 29144 CAGAAGAAAGAAAGCCCTTAATTGATGGTGTA-GTCA---AGAACAATGGCACAATCATG 29199 Query 7378 AAAGCCATCATTGAAGGTACCGGGAAATTAGGACTGAGAATTAATCGAGA-TGAAACGTT 7436 || || | | ||||| || |||| | || || | ||| ||| |||| ||| ||| | Sbjct 29200 AATGCGGTAGTAGAAGGAACAAAGAAACTTGGTCTAATAATCAAT-GAGAGTGAGACGAT 29258 Query 7437 GACTTCCACCGATTATTTGAATTATGGGAAAGTTGTCTTCTTTCGAGGGAATATGTTGCC 7496 || | ||||| |||| |||||||||||| ||| ||| |||| || || | || Sbjct 29259 CCAATCAGCAGATTACATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCC 29318 Query 7497 ATTAGCCATCAAAAAATGGTCTCGCGTCACCTGCACAACAAATGATCAAATACCATCCTT 7556 ||||| || ||| | | |||| | | ||||| ||||||||||||||| |||||||| Sbjct 29319 ATTAGTCACCAAGAGAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTT 29378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37437286939676