Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033703.1 Length=9314 Score E Sequences producing significant alignments: (Bits) Value seq1383 149 4e-32 >seq1383 Length=104272 Score = 149 bits (164), Expect = 4e-32 Identities = 623/957 (65%), Gaps = 35/957 (4%) Strand=Plus/Plus Query 4204 AGAA-ATCAATGAGAACGGATTATCAAAGGAAGACCTTGTGATTGGTTTGAAAGGGAAGG 4262 |||| |||| |||| | ||||| | ||||| || || || || || | || |||| Sbjct 8271 AGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAGAGCCAAGG 8330 Query 4263 AGAGAGAGGTTAAGAGAACGGGACGATATTTCTCACTCATGAGTTGGAATCTAAGACTGT 4322 | ||||| || || | ||||| ||| ||||| | ||| ||| | || ||| | Sbjct 8331 AAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAAT 8390 Query 4323 ATTTTGTCATCACAGAGTATTTAATCAAGAAATATTATGTACCACTTTTTTCCGGGTTGA 4382 | ||||||||||||||||| | ||||| ||||||||||||||||||| || || | Sbjct 8391 ACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTTTCAAAGGCTTAA 8450 Query 4383 CTATGGCTGACAGTTTTAATATGGTTATGAGAAAACTGATCGATCGTACATCTGGG-CAA 4441 | ||||| |||| | | | || || | || |||| ||| | | ||||| || Sbjct 8451 CAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCTC-CCTGGGACAG 8509 Query 4442 GGAGAGAAAGGATATGAAAGAATCACTTTTGCAAATCACTTCGATTATTCAAAATGGAAC 4501 ||| | | || |||| | |||| || ||| |||||||| |||||||||| Sbjct 8510 GGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATGAAAAATGGAAC 8569 Query 4502 AA-CACACAAAGAGGGAAAGCAAATAATCCAGTGTTCCGAGTTATGGGGAAATTCTTGGG 4560 || ||| |||||| | ||| || || ||| || ||||||||||| || || Sbjct 8570 AATCAC-CAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGG 8628 Query 4561 GCTCCCA--AATATCATCTCAAGAACTCATGAGTTCTTCGAGAGGAGCTGGATTTACTAC 4618 | ||| | | | |||| | || ||| |||| || || || | |||| ||| Sbjct 8629 ATTACCAGCACTTTTTTCTC--GTACACATCAGTTTTTTAAGGAAAGTTTAGTTTATTAC 8686 Query 4619 AATGACAGATCGGATTTGATGGAACTAGTTGAAGGTGAAATCCGCAAC-CGAACCACCCA 4677 ||||| ||| | || || ||| | || ||| || |||| || |||| | | Sbjct 8687 AATGAAAGACCCGACTTAATG--ATCAG-TGATGGAGAAACATTATACTCGAAGGAAGGA 8743 Query 4678 AA--GAGTTTGCTGGAATGGGCAACTGGGGGGACTTGAAGGGCTAAGACAAAAAGGATGG 4735 | | || || |||||||| || || || || || ||||| || ||||| | || ||| Sbjct 8744 TATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGG 8803 Query 4736 AGTGTGGTAAGCCTACTTGTAATTGAACGTGAAGGCAAAATACGAAACACAAAAATCAAA 4795 ||| | ||| ||| || ||| | || | ||| | |||||||| || || | | || Sbjct 8804 AGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAAC 8863 Query 4796 ATACTCGCACAGGGGGACAATCAAGTTGTTTGCACCTCA-TATAAATTACCTGCGGATAT 4854 | | | || || || ||||| || ||| | || | |||| |||||| | || | | || Sbjct 8864 ACATTGGCTCAAGGAGACAACCAGGTTATATGTA-CTCACTATAAAATCCCAACCGTTAG 8922 Query 4855 GACCCATCAAACTGTTACCGACGAGATCCCACATATTTGG-GAGA---ATAACAGA---G 4907 || | | || | | | || ||| |||| || | || | |||| | | Sbjct 8923 AACACCTGAA---GAAA---AAAAG-CCCCTCATACAAGGAGCGATTCAGAACACAAATG 8975 Query 4908 AAATAGTTAAAGCTATTGTCTCTGGGACTACAAAATTGGGATTGGTGGTAAATGAGGATG 4967 || | || || | ||| ||| || | || || ||||| | | ||| | || Sbjct 8976 CCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCATCAATAAACGTG 9035 Query 4968 AGACGCTGACAGCTAG-TGATTATCTCAATTATGGGAAAGTTATACTTTACAGAGGAAAT 5026 | || | ||| || |||||| | |||||||| ||||| | | | ||||||| Sbjct 9036 AAAC-CATACAATCAGCAGATTATATGAATTATGGCAAAGTACCGATCTTCCAAGGAAAT 9094 Query 5027 ATGTTGCCACTGATAACAAAACGATGGTCAAGAGTTACGTGTGTGACTAATGATCAGATT 5086 || ||||| |||| || ||||| ||||||| | || |||||||| |||||||||| | Sbjct 9095 ATCTTGCCGTTGATTACTAAACGTGTGTCAAGAATGACCTGTGTGACCAATGATCAGA-T 9153 Query 5087 CCAACCA-TTGGTAATATCATGTCAGCTGTTTCAACAAATGCCTTAACAGTTGCACA 5142 ||| || ||| ||| | | ||||| || || |||||||| || || | ||||| Sbjct 9154 CCATTCATTTGAAAATGTACTCTCAGCAGTATCTACAAATGCATTGACGATCGCACA 9210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29669697465304