Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq1383 168 5e-38 seq283 95.1 1e-15 >seq1383 Length=104272 Score = 168 bits (186), Expect = 5e-38 Identities = 311/451 (69%), Gaps = 4/451 (1%) Strand=Plus/Plus Query 6179 CCTGAATTCCTCGAAAAGATTGATAAAGAAGGGCTTGATTGGGAGTCGCTAGTAATAGGT 6238 |||| ||| ||| | ||||| | | ||||| | | | | || ||| ||||| || Sbjct 8258 CCTGTATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGA 8317 Query 6239 CTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGGAGGTTTTTTGCTTTAATGTCTTGG 6298 ||||||| || ||||||||| ||||| | | || || || || |||| ||||| ||| Sbjct 8318 TTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGG 8377 Query 6299 GAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCAT-AAAGAAGTATTTCGTTCCGTT 6357 || | ||||| || ||||| || || |||| || || |||||| |||| || || | Sbjct 8378 GAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAA-TATTATGTACCACT 8436 Query 6358 ACTAAGAGACTTAACAATGGCAGACGACTTGAATGATGTCATAAGTAAAATGTTGTCTAG 6417 | | || |||||||||||| ||| || ||| || || | || ||| | ||| Sbjct 8437 TTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAG 8496 Query 6418 TACATCAGGACAAGGGTTGGATGACTACTCAGTAGTATCTATTTCTAACCACTTAGATTA 6477 | ||||| || || ||||||||| | | | ||| | |||||| | ||||| Sbjct 8497 CTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTA 8556 Query 6478 CGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATCCTGTATTCAGAGTGATGGG 6537 || |||||||||||||||||||| | || |||| | |||||||||| |||||||| Sbjct 8557 TGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGG 8616 Query 6538 TCAATTTTTGGGA-AAGCCTAACTTATTCACTAGGACACATGAGTTTTTCGAGAAATCGT 6596 ||||||| ||| | | |||| || || | |||||| ||||||| || || | Sbjct 8617 GAAATTTTTTGGATTACCAGCACTT-TTTTCTCGTACACATCAGTTTTTTAAGGAAAGTT 8675 Query 6597 TGATTTATTATGTTGATAGACCTGATTTGAT 6627 | ||||||| ||| ||||| || || || Sbjct 8676 TAGTTTATTACAATGAAAGACCCGACTTAAT 8706 >seq283 Length=322283 Score = 95.1 bits (104), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 6368 TTAACAATGGCAGACGACTTGAATGATGTCATAAGTAAAATGTTGTCTAGTACATCAGGA 6427 || || |||||||| ||| |||| || ||| |||||| || ||||| ||||| Sbjct 292295 TTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAAATGATGGGCAGTACCACAGGA 292353 Query 6428 CAAGGGTTGGATGACTACTCAGTA-GTATCTATTTCTAACCACTTAGATTACGAGAAATG 6486 ||||| | | | ||||| || | || ||| |||||||| | |||||||| ||||| Sbjct 292354 CAAGGACTAGGTAACTACG-AGCATGTTGGAATTGCTAACCACATCGATTACGAAAAATG 292412 Query 6487 GAACAATCACCAAAGGAAGGAATCAAATGATCCTGTATTCAGAGTGATGGGTCAAT 6542 |||||||| || |||| |||| ||||| || || |||| ||| |||||||||| Sbjct 292413 GAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAAAGTAATGGGTCAAT 292468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40011560108416