Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq124392 257 4e-66 seq124393 251 2e-64 >seq124392 Length=286 Score = 257 bits (284), Expect = 4e-66 Identities = 207/246 (84%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 166 GACTAGAGTG-TGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATAT 224 ||||||||| ||| |||||||||| ||||| || ||||||| |||||||||||||| || Sbjct 1 GACTAGAGTACTGT-AGAGGGGGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGAT 59 Query 225 GTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAA 284 || ||||| ||| |||||||||| ||||||||| | |||||| |||| |||| Sbjct 60 CTGAAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAGATACTGACACTCAGATGCGAA 119 Query 285 AGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACT 344 |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct 120 AGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACT 179 Query 345 AGTTGTTGGG-GATTTACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGG 403 |||||||||| || || | ||| |||||| |||||||||| |||| ||||||||||| Sbjct 180 AGTTGTTGGGAGACTTGATCTCTTAGTAACGAAGCTAACGCGATAAGTAGACCGCCTGGG 239 Query 404 GAATAC 409 || ||| Sbjct 240 GAGTAC 245 >seq124393 Length=272 Score = 251 bits (278), Expect = 2e-64 Identities = 195/231 (84%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 180 AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAA 239 |||||| | |||||||| |||||| ||||||| | ||||||| ||||||||| | | Sbjct 1 AGAGGGCAGCGGAATTCCTAGTGTAGGGGTGAAATCCATAGATATTAGGAGGAACATCGA 60 Query 240 TGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 ||||||||||||| |||| ||| ||||||||| | |||||||||||||||||||||| Sbjct 61 TGGCGAAGGCAGCTGTCTGGCTTAATACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAA 120 Query 300 CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATT 358 ||||||||||||||||||||||||||||| |||||||| || ||||||||||||| || | Sbjct 121 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGTTGTTGGGAGACT 180 Query 359 TACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | | ||| |||||| |||||||||| |||| ||||||||||||| ||| Sbjct 181 TGATCTCTTAGTAACGAAGCTAACGCGATAAGTAGACCGCCTGGGGAGTAC 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1286336950912