Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq154689 131 2e-28 seq149620 109 6e-22 seq149622 107 2e-21 seq149625 104 2e-20 seq149624 98.7 1e-18 seq124544 86.0 7e-15 seq124543 86.0 7e-15 seq29611 80.6 3e-13 seq124546 77.0 3e-12 seq124545 77.0 3e-12 seq124542 75.2 1e-11 seq142750 73.4 4e-11 >seq154689 Length=347 Score = 131 bits (144), Expect = 2e-28 Identities = 125/158 (79%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||||||||||||||||| || || ||||||||||||| |||||| ||| || |||| Sbjct 193 CAAACGGACACACGTAGTCAAGTAGAGAATACTAAGGCGCTCGAGTGATTCATGGCTAAG 252 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| || ||||||||||||||| ||| || | || ||| ||| | Sbjct 253 GAACTCGGCAAAATGGTCCTGTAACTTCGGGAGAAA-GGACGCTCCCC--TCCGGGGGAG 309 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAAC 181 ||||| ||| || |||||| |||||||| ||||||| Sbjct 310 CCGCAGTGAAATGGCCCAGGCGACTGTTTACCAAAAAC 347 >seq149620 Length=541 Score = 109 bits (120), Expect = 6e-22 Identities = 133/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| |||||| | || || |||||||||| ||| ||| | |||| Sbjct 264 CAAACCGACACAGGTAGTCAAGGAGAGAATCCTAAGGCGCTCGAGAGAACTCTTGCTAAG 323 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAATG-- 138 ||||| |||||| |||||| |||||||||||| || |||| || || || | Sbjct 324 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCCCGTTAGTGTTAACGCA 383 Query 139 ---GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCA 195 || || ||||| ||||||| ||| ||||||||||| |||||||| ||| || ||| | Sbjct 384 CGAGGGGGCCGCAGTGAATAGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTA 443 Query 196 A 196 | Sbjct 444 A 444 >seq149622 Length=436 Score = 107 bits (118), Expect = 2e-21 Identities = 134/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || | | ||| ||| ||||||| ||| |||| | |||| Sbjct 157 CGCAAACCGACACAGGTGGGTAAGGTGAGTATCCTAAGGCTAGCGAGAGAATTATTGTTA 216 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAATG 138 ||||||| |||||| |||||| |||||||||||| || |||| || || || | Sbjct 217 AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCCCGTTAGTGTTAACG 276 Query 139 -----GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGC 193 || || ||||| ||||||| ||| ||||||||||| |||||||| ||| || ||| Sbjct 277 CACGAGGGGGCCGCAGTGAATAGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGC 336 Query 194 CAA 196 || Sbjct 337 TAA 339 >seq149625 Length=358 Score = 104 bits (114), Expect = 2e-20 Identities = 133/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| |||| || | ||| || ||||| | | | ||| | |||| Sbjct 79 CGCAAACCGACACAGGTAGGCGAGATGAGAATTCTAAGATGAGCGGGAGAACCCTTGTTA 138 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAATG 138 ||||||| |||||| |||||| |||||||||||| || |||| || || || | Sbjct 139 AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCCCGTTAGTGTTAACG 198 Query 139 -----GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGC 193 || || ||||| ||||||| ||| ||||||||||| |||||||| ||| || ||| Sbjct 199 CACGAGGGGGCCGCAGTGAATAGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGC 258 Query 194 CAA 196 || Sbjct 259 TAA 261 >seq149624 Length=372 Score = 98.7 bits (108), Expect = 1e-18 Identities = 132/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| |||| | | || || ||||||| | |||| || |||| Sbjct 93 CGCAAACCGACACAGGTAGATGAGGAGAGAATCCTAAGGCCGGCGGAAGAATTACTGTTA 152 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAG---AAATG 138 ||||||| |||||| || ||| |||||||||||| || |||| || || || | Sbjct 153 AGGAACTCGGCAAATTGGCCCCGTAACTTCGGGAGAAGGGGTGCCCCGTTAGTGTTAACG 212 Query 139 -----GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGC 193 || || ||||| ||||||| ||| ||||||||||| |||||||| ||| || ||| Sbjct 213 CACGAGGGGGCCGCAGTGAATAGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGC 272 Query 194 CAA 196 || Sbjct 273 TAA 275 >seq124544 Length=315 Score = 86.0 bits (94), Expect = 7e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||||||||| ||| ||| ||| Sbjct 161 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGCTTGAGAGAACTCGGGTGAAG 220 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | |||||||||||| || Sbjct 221 GAACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 255 >seq124543 Length=391 Score = 86.0 bits (94), Expect = 7e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||||||||| ||| ||| ||| Sbjct 237 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGCTTGAGAGAACTCGGGTGAAG 296 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | |||||||||||| || Sbjct 297 GAACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 331 >seq29611 Length=265 Score = 80.6 bits (88), Expect = 3e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| ||| || |||| |||| || ||||| |||||||||||| ||| | ||||| Sbjct 187 CGCAAACCGACTCAGGTAGATGGGTAGAGTATACCAAGGCGCTTGAGAGAACCCTGGTTA 246 Query 82 AGGAACTAGGCAAACTGAC 100 ||||||| |||||| |||| Sbjct 247 AGGAACTCGGCAAATTGAC 265 >seq124546 Length=262 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || || ||| || |||| |||||||||||| ||| ||| ||| Sbjct 108 CAAACCGACACAGGTGATCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 167 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | |||||||||||| || Sbjct 168 GAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAA 202 >seq124545 Length=298 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||| || ||| ||| || |||| |||||||||||| ||| ||| ||| Sbjct 164 CAAACCAACACTGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 223 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | | |||||||||||| || Sbjct 224 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 258 >seq124542 Length=457 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | ||| || |||| |||||||||||| ||| ||| |||| Sbjct 324 AAACCGACACAGGTGGGTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGG 383 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | | |||||||||||| || Sbjct 384 AACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 417 >seq142750 Length=329 Score = 73.4 bits (80), Expect = 4e-11 Identities = 81/108 (75%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| || | ||| ||| ||| ||||||||| || ||| | ||||| Sbjct 160 CGTAAACCGACACAGGTGGGTGGGATGAGTATTCTAAGGCGCGTGGAAGAACCCTGGTTA 219 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC 129 ||||||| ||||||| | | ||| |||||| |||| | || ||||| Sbjct 220 AGGAACTCTGCAAACTAGCACCGTATCTTCGGTATAAGGTGTGCCTAC 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529897917912