Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq167638 122 8e-26 seq167631 122 8e-26 seq167629 122 8e-26 seq167628 122 8e-26 seq167627 122 8e-26 seq167626 122 8e-26 seq167625 122 8e-26 seq149623 105 6e-21 seq167637 91.5 1e-16 seq149625 82.4 7e-14 seq149624 82.4 7e-14 seq149622 82.4 7e-14 seq149621 82.4 7e-14 seq149620 82.4 7e-14 seq149619 82.4 7e-14 seq166869 75.2 1e-11 seq149618 75.2 1e-11 >seq167638 Length=334 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 313 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 254 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 253 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 224 >seq167631 Length=386 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 365 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 306 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 305 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 276 >seq167629 Length=416 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 395 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 336 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 335 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 306 >seq167628 Length=483 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 462 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 403 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 402 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 373 >seq167627 Length=484 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 463 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 404 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 403 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 374 >seq167626 Length=485 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 464 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 405 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 404 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 375 >seq167625 Length=509 Score = 122 bits (134), Expect = 8e-26 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 |||||||||| |||||||||||||| ||| |||||| ||||||| ||||| |||||||| Sbjct 488 CGACTGTTTACCAAAAACACAGCACTTTGCTAACACGTAAGTGGATGTATAAGGTGTGAC 429 Query 129 GCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||| ||||||||||||||| Sbjct 428 GCCTGCCCGGTGCTCGAAGGTTAATTGATG 399 >seq149623 Length=387 Score = 105 bits (116), Expect = 6e-21 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| |||||||||| ||||||||| |||||| || ||||| Sbjct 249 AGGCCCAGGCGACTGTTTATCAAAAACACAGGTCTCTGCAAAGCCGAAAGGCGAAGTATA 308 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 309 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 341 >seq167637 Length=344 Score = 91.5 bits (100), Expect = 1e-16 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 35 TAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACT 94 |||||| | | || || ||| | ||||| ||||||||||| |||||||||| || Sbjct 344 TAAGCTGAAGATGGCCGCAGAGAATAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCT 285 Query 95 CTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| || || ||| || |||||||| |||| |||||||||||| |||||||||| Sbjct 284 CTGCTAAAGCGCAAGCTGAAGTATAGGGGCTGACACCTGCCCGGTGCTGGAAGGTTAA 227 >seq149625 Length=358 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || |||||||| ||||||| || |||||| || || ||| || ||||| Sbjct 220 AGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTAAGTCGTAAGACGAAGTATA 279 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 280 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 312 >seq149624 Length=372 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || |||||||| ||||||| || |||||| || || ||| || ||||| Sbjct 234 AGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTAAGTCGTAAGACGAAGTATA 293 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 294 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 326 >seq149622 Length=436 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || |||||||| ||||||| || |||||| || || ||| || ||||| Sbjct 298 AGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTAAGTCGTAAGACGAAGTATA 357 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 358 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 390 >seq149621 Length=465 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || |||||||| ||||||| || |||||| || || ||| || ||||| Sbjct 327 AGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTAAGTCGTAAGACGAAGTATA 386 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 387 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 419 >seq149620 Length=541 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || |||||||| ||||||| || |||||| || || ||| || ||||| Sbjct 403 AGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTAAGTCGTAAGACGAAGTATA 462 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 463 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 495 >seq149619 Length=891 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || |||||||| ||||||| || |||||| || || ||| || ||||| Sbjct 753 AGGCCCAAGCAACTGTTTACCAAAAACATAGGTCTCTGCTAAGTCGTAAGACGAAGTATA 812 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 813 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 845 >seq166869 Length=261 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/93 (78%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 |||||| ||||||||||| |||||||||| || ||| || |||| ||||||| Sbjct 140 AGGCCGG-GCGACTGTTTAACAAAAACACAGGTCTGTGCTAAGGGGAAACCCTACGTATA 82 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| ||||||||||||||| Sbjct 81 CAGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 49 >seq149618 Length=956 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/93 (78%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 |||||| ||||||||||| |||||||||| || ||| || |||| ||||||| Sbjct 768 AGGCCGG-GCGACTGTTTAACAAAAACACAGGTCTGTGCTAAGGGGAAACCCTACGTATA 826 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| ||||||||||||||| Sbjct 827 CAGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475631263668