Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq215694 86.0 3e-15 seq215693 84.2 1e-14 seq217981 71.6 6e-11 >seq215694 Length=950 Score = 86.0 bits (94), Expect = 3e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || Sbjct 435 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 379 >seq215693 Length=1484 Score = 84.2 bits (92), Expect = 1e-14 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA-GC 59 ||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| || || Sbjct 969 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGCGAAGTGGGAACAGCTCAGGC 910 Query 60 GCCGAATCCCC 70 | ||||| || Sbjct 909 GTGGAATCTCC 899 >seq217981 Length=325 Score = 71.6 bits (78), Expect = 6e-11 Identities = 48/54 (89%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGC 54 ||||||||||||||| ||||||||| ||||||||||||| ||| ||||| ||| Sbjct 140 GGAAAAGAAACTAACTAGGATTCCCCCAGTAACGGCGAGCGAAGCGGGAACAGC 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229853459520