Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq167637 194 2e-47 seq167636 152 6e-35 seq167635 152 6e-35 seq167633 152 6e-35 seq167632 152 6e-35 seq167627 152 6e-35 seq167626 152 6e-35 seq167638 149 7e-34 seq167631 143 3e-32 seq167639 134 2e-29 seq167634 134 2e-29 seq167630 134 2e-29 seq167629 134 2e-29 seq167628 134 2e-29 seq167625 134 2e-29 >seq167637 Length=344 Score = 194 bits (214), Expect = 2e-47 Identities = 145/179 (81%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| | Sbjct 14 CGGGGTCTTTCCGTCCCGTTGCGGGTAATCGGCATCTTCACCGATACTTCAATTTCACCG 73 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || |||||||| | |||||||||||||||||||||||||||| Sbjct 74 AGCTCATGGCTGAGACAGTGCCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCC 133 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 134 GACAAGGAATTTCGCTACCTTAGGACCGTTATCGTTACGGCCGCCGTTTACTGGGGCTT 192 >seq167636 Length=366 Score = 152 bits (168), Expect = 6e-35 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||||||||| | |||||||||| | |||||||||||||| | Sbjct 167 CGGGGTCTTTCCGTCCTGCCGCGGGTAACCAGCATCTTCACTGGTACTACAATTTCACCG 226 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | |||||||||| |||||| ||||||| ||||||||||||||| Sbjct 227 GGTCCCTTGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 286 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 287 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 345 >seq167635 Length=367 Score = 152 bits (168), Expect = 6e-35 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||||||||| | |||||||||| | |||||||||||||| | Sbjct 168 CGGGGTCTTTCCGTCCTGCCGCGGGTAACCAGCATCTTCACTGGTACTACAATTTCACCG 227 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | |||||||||| |||||| ||||||| ||||||||||||||| Sbjct 228 GGTCCCTTGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 287 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 288 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 346 >seq167633 Length=378 Score = 152 bits (168), Expect = 6e-35 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||||||||| | |||||||||| | |||||||||||||| | Sbjct 167 CGGGGTCTTTCCGTCCTGCCGCGGGTAACCAGCATCTTCACTGGTACTACAATTTCACCG 226 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | |||||||||| |||||| ||||||| ||||||||||||||| Sbjct 227 GGTCCCTTGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 286 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 287 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 345 >seq167632 Length=379 Score = 152 bits (168), Expect = 6e-35 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||||||||| | |||||||||| | |||||||||||||| | Sbjct 168 CGGGGTCTTTCCGTCCTGCCGCGGGTAACCAGCATCTTCACTGGTACTACAATTTCACCG 227 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | |||||||||| |||||| ||||||| ||||||||||||||| Sbjct 228 GGTCCCTTGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 287 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 288 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 346 >seq167627 Length=484 Score = 152 bits (168), Expect = 6e-35 Identities = 122/151 (81%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||||||||| | |||||||||| | |||||||||||||| | Sbjct 167 CGGGGTCTTTCCGTCCTGCCGCGGGTAACCAGCATCTTCACTGGTACTACAATTTCACCG 226 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | |||||||||| |||||| ||||||| ||||||||||||||| Sbjct 227 GGTCCCTTGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 286 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 287 GACAAGGAATTTCGCTACCTTAGGACCGTTA 317 >seq167626 Length=485 Score = 152 bits (168), Expect = 6e-35 Identities = 122/151 (81%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||||||||| | |||||||||| | |||||||||||||| | Sbjct 168 CGGGGTCTTTCCGTCCTGCCGCGGGTAACCAGCATCTTCACTGGTACTACAATTTCACCG 227 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | |||||||||| |||||| ||||||| ||||||||||||||| Sbjct 228 GGTCCCTTGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 287 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 288 GACAAGGAATTTCGCTACCTTAGGACCGTTA 318 >seq167638 Length=334 Score = 149 bits (164), Expect = 7e-34 Identities = 121/151 (80%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| |||||||| |||||| ||||||| | ||||| ||| | | Sbjct 17 CGGGGTCTTTCCGTCCTGCCGCGGGTATCCGGCATTTTCACCGGAATTACAACTTCGCCG 76 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||||| |||||||||||||||||||||||| Sbjct 77 AGATCCACGTTGAGACAGTGTTCAACTCGTTACACGATTCGTGCAGGTCGGAACTTACCC 136 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 137 GACAAGGAATTTCGCTACCTTAGGACCGTTA 167 >seq167631 Length=386 Score = 143 bits (158), Expect = 3e-32 Identities = 122/152 (80%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||||| || ||||||||| |||| | | ||||||||||| Sbjct 69 CGGGGTCTTTCCGTCTAGCCGCGGATATACGGCATCTTAACCGCAATTTCAATTTCACTG 128 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||| ||||||||||||||||||||||||| Sbjct 129 AG-TCTCGGGTGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 187 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 188 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 219 >seq167639 Length=310 Score = 134 bits (148), Expect = 2e-29 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||| | | |||||||||| | ||||||||||||||| Sbjct 99 CGGGGTCTTTCCGTCTTTCCGCGGGAACACAGCATCTTCACTGTGACTACAATTTCACTG 158 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||| |||||| |||||||||| | ||| || Sbjct 159 AGGTCCTCGTTGAGACAGGAGCCTAATCGTTACGCCATTCATGCAGGTCGGTATTTAACC 218 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 219 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 277 >seq167634 Length=377 Score = 134 bits (148), Expect = 2e-29 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||| | | |||||||||| | ||||||||||||||| Sbjct 166 CGGGGTCTTTCCGTCTTTCCGCGGGAACACAGCATCTTCACTGTGACTACAATTTCACTG 225 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||| |||||| |||||||||| | ||| || Sbjct 226 AGGTCCTCGTTGAGACAGGAGCCTAATCGTTACGCCATTCATGCAGGTCGGTATTTAACC 285 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 286 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 344 >seq167630 Length=403 Score = 134 bits (148), Expect = 2e-29 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||| | | |||||||||| | ||||||||||||||| Sbjct 192 CGGGGTCTTTCCGTCTTTCCGCGGGAACACAGCATCTTCACTGTGACTACAATTTCACTG 251 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||| |||||| |||||||||| | ||| || Sbjct 252 AGGTCCTCGTTGAGACAGGAGCCTAATCGTTACGCCATTCATGCAGGTCGGTATTTAACC 311 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 312 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 370 >seq167629 Length=416 Score = 134 bits (148), Expect = 2e-29 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||| | | |||||||||| | ||||||||||||||| Sbjct 99 CGGGGTCTTTCCGTCTTTCCGCGGGAACACAGCATCTTCACTGTGACTACAATTTCACTG 158 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||| |||||| |||||||||| | ||| || Sbjct 159 AGGTCCTCGTTGAGACAGGAGCCTAATCGTTACGCCATTCATGCAGGTCGGTATTTAACC 218 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 219 GACAAGGAATTTCGCTACCTTAGGACCGTTA 249 >seq167628 Length=483 Score = 134 bits (148), Expect = 2e-29 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||| | | |||||||||| | ||||||||||||||| Sbjct 166 CGGGGTCTTTCCGTCTTTCCGCGGGAACACAGCATCTTCACTGTGACTACAATTTCACTG 225 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||| |||||| |||||||||| | ||| || Sbjct 226 AGGTCCTCGTTGAGACAGGAGCCTAATCGTTACGCCATTCATGCAGGTCGGTATTTAACC 285 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 286 GACAAGGAATTTCGCTACCTTAGGACCGTTA 316 >seq167625 Length=509 Score = 134 bits (148), Expect = 2e-29 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||| | | |||||||||| | ||||||||||||||| Sbjct 192 CGGGGTCTTTCCGTCTTTCCGCGGGAACACAGCATCTTCACTGTGACTACAATTTCACTG 251 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||| ||| |||||| |||||||||| | ||| || Sbjct 252 AGGTCCTCGTTGAGACAGGAGCCTAATCGTTACGCCATTCATGCAGGTCGGTATTTAACC 311 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 312 GACAAGGAATTTCGCTACCTTAGGACCGTTA 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545858698572