Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq215684 98.7 1e-18 seq170138 98.7 1e-18 seq7407 86.0 7e-15 seq215685 77.0 4e-12 >seq215684 Length=705 Score = 98.7 bits (108), Expect = 1e-18 Identities = 97/126 (77%), Gaps = 6/126 (5%) Strand=Plus/Minus Query 9 GAAACCAACAAAATAGGG------ACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||||||||||||||| || | ||||||||| ||||||||||||| | |||| Sbjct 290 GAAACCAACAAAATAGCACAACAAACCAAAGTCCTATTCCATTATTCCATGCTTACGTAT 231 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCC 122 || || |||||||||||||||||||||||| |||| ||||| || || ||| | Sbjct 230 TCAAGCCCCGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTGGCGGATCCCGC 171 Query 123 GCACAC 128 |||||| Sbjct 170 GCACAC 165 >seq170138 Length=482 Score = 98.7 bits (108), Expect = 1e-18 Identities = 97/126 (77%), Gaps = 6/126 (5%) Strand=Plus/Plus Query 9 GAAACCAACAAAATAGGG------ACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||||||||||||||| || | ||||||||| ||||||||||||| | |||| Sbjct 136 GAAACCAACAAAATAGCACAACAAACCAAAGTCCTATTCCATTATTCCATGCTTACGTAT 195 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCC 122 || || |||||||||||||||||||||||| |||| ||||| || || ||| | Sbjct 196 TCAAGCCCCGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTGGCGGATCCCGC 255 Query 123 GCACAC 128 |||||| Sbjct 256 GCACAC 261 >seq7407 Length=208 Score = 86.0 bits (94), Expect = 7e-15 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCG-GGCGTAAGCCTGCTTTGAACACTCTAA 92 ||||||| |||||||||||||| |||||| |||| ||||||||| ||||| |||| Sbjct 200 TCCTATTTTATTATTCCATGCTGCAGTATTCACGGCGCTAGCCTGCTTGAAACACCCTAA 141 Query 93 TTTTCTCAAGGTAAAAGTCCTG 114 ||||||||| |||||||| ||| Sbjct 140 TTTTCTCAAAGTAAAAGTTCTG 119 >seq215685 Length=346 Score = 77.0 bits (84), Expect = 4e-12 Identities = 64/78 (82%), Gaps = 4/78 (5%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGGGCG----TAAGCCTGCTTTGAACACTC 89 ||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct 330 TCCTATTCTATTATTCCATGCACCATTATTCAGGCCAGCTTCAGCCTGCTTTGAACACTC 271 Query 90 TAATTTTCTCAAGGTAAA 107 ||||||| |||| ||||| Sbjct 270 TAATTTTTTCAAAGTAAA 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593741040552