Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq133600 132 3e-29 seq133601 131 1e-28 seq133602 127 1e-27 seq133598 122 6e-26 seq133605 102 6e-20 seq133603 84.2 2e-14 seq116708 84.2 2e-14 seq116707 84.2 2e-14 seq116706 84.2 2e-14 seq100891 82.4 5e-14 >seq133600 Length=324 Score = 132 bits (146), Expect = 3e-29 Identities = 113/138 (82%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct 316 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCGA 257 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| ||| |||||| ||| ||| ||| |||||||||||| | Sbjct 256 CTTTCGTCTCTGCTCGGCGTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGCACTCT 197 Query 121 CACTAC-GATTTCCGACC 137 || || |||||| |||| Sbjct 196 AACAACTGATTTCTGACC 179 >seq133601 Length=313 Score = 131 bits (144), Expect = 1e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct 305 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTA 246 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| |||||| ||| | ||||| |||| Sbjct 245 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTCAAGCTGGCTTATACCATTATACTAA 186 Query 121 CACTACGATTTCCGACC 137 | | ||| ||||||| Sbjct 185 CCGCATGATGTCCGACC 169 >seq133602 Length=313 Score = 127 bits (140), Expect = 1e-27 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 305 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 246 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || | |||||| |||| || |||||||| ||| ||||||| |||| Sbjct 245 CTTTCGTACCTGATCGACTTGTTGGTCTCACAGTCAAGCACCCTTGTGCCATTACACT 188 >seq133598 Length=371 Score = 122 bits (134), Expect = 6e-26 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| ||||||||||| | || ||||||||||| | || Sbjct 363 TAGCTTTTATCCGTTGAGCGACGGCCCTTCCATGCGGGACCGCCGGATCACTAAGTCCAA 304 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| || |||| | Sbjct 303 CTTTCGTTCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCTCTTGTGCCTTTACACTCT 244 Query 121 CACTACGATTTCCGACCGTA 140 ||||||||||||||||| Sbjct 243 ACGTACGATTTCCGACCGTA 224 >seq133605 Length=304 Score = 102 bits (112), Expect = 6e-20 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 15 TGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCT 74 ||||||| ||||||||||||| || ||||||||||| | || |||||| |||| Sbjct 304 TGAGCGACGGCCCTTCCATTCGGTACCGCCGGATCACTAAGCCCGACTTTCGTCCTTGCT 245 Query 75 CTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTACGATTTCCG 134 | | ||| |||||||||||||| | ||| |||| ||||||| | ||||||||||| Sbjct 244 CGACCTGTATGTCTCGCAATCAAGCTCCCTTATGCCTTTGCACTCTTCGTACGATTTCCG 185 Query 135 ACCGTA 140 |||||| Sbjct 184 ACCGTA 179 >seq133603 Length=308 Score = 84.2 bits (92), Expect = 2e-14 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 TGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCT 74 ||||||| ||||||||||||| || ||||||||||| | || |||||| |||| Sbjct 308 TGAGCGACGGCCCTTCCATTCGGTACCGCCGGATCACTAAGCCCGACTTTCGTCCTTGCT 249 Query 75 CTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTACGATTTCCG 134 | | ||| |||||||||||||| | ||| |||| ||||||| | |||||||| Sbjct 248 CGACCTGTATGTCTCGCAATCAAGCTCCCTTCTGCCTTTGCACTCTTCGCGCGATTTCCA 189 Query 135 ACCG 138 |||| Sbjct 188 ACCG 185 >seq116708 Length=431 Score = 84.2 bits (92), Expect = 2e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| ||||||||||||| || ||||||||||| | || Sbjct 329 TAGCTTTTATCCGTTGAGCGACGGCCCTTCCATTCGGTACCGCCGGATCACTAAGCCCGA 388 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGC 99 |||||| ||||| | ||| |||||||||||||| Sbjct 389 CTTTCGTCCTTGCTCGACCTGTATGTCTCGCAATCAAGC 427 >seq116707 Length=599 Score = 84.2 bits (92), Expect = 2e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| ||||||||||||| || ||||||||||| | || Sbjct 497 TAGCTTTTATCCGTTGAGCGACGGCCCTTCCATTCGGTACCGCCGGATCACTAAGCCCGA 556 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGC 99 |||||| ||||| | ||| |||||||||||||| Sbjct 557 CTTTCGTCCTTGCTCGACCTGTATGTCTCGCAATCAAGC 595 >seq116706 Length=621 Score = 84.2 bits (92), Expect = 2e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| ||||||||||||| || ||||||||||| | || Sbjct 519 TAGCTTTTATCCGTTGAGCGACGGCCCTTCCATTCGGTACCGCCGGATCACTAAGCCCGA 578 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGC 99 |||||| ||||| | ||| |||||||||||||| Sbjct 579 CTTTCGTCCTTGCTCGACCTGTATGTCTCGCAATCAAGC 617 >seq100891 Length=347 Score = 82.4 bits (90), Expect = 5e-14 Identities = 92/120 (77%), Gaps = 6/120 (5%) Strand=Plus/Minus Query 2 ACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGACC 58 ||||||||||| |||| | |||| ||||| || ||| |||| |||||||| | || Sbjct 347 ACCTTTTATCCAATGAGTTACGGCCTTTCCA--CACAGC-ACCGTAAGATCACTAAGCCC 291 Query 59 TGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||||||||||||||||| | ||| ||||||| | |||| | ||| |||| || |||| Sbjct 290 TGCTTTCGCATCTGCTCGACGTGTCCGTCTCGCAGTTAAGCTCCCTTCTGCCTTTACACT 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351165007600