Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq215684 141 9e-32 seq170138 141 9e-32 seq215685 82.4 8e-14 >seq215684 Length=705 Score = 141 bits (156), Expect = 9e-32 Identities = 143/185 (77%), Gaps = 7/185 (4%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69 || ||||||||||||||||||||| |||||||||||||| ||| |||||| | | ||| Sbjct 183 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGGGGCTTGAATACGTAAGCAT 242 Query 70 GGAATAATAGAATAGGAC------GTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 |||||||| ||||||||| || || ||||||||| |||||| |||||| | Sbjct 243 GGAATAATGGAATAGGACTTTGGTTTGTTGTGCTATTTTGTTGGTTTCCGGGACCG-AAG 301 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| | | || ||| ||||| | ||||| ||||| |||||||||||||| Sbjct 302 TAATGATTGAGAGAGACAGTTGGGGGCATTCGTATTTCGCTGTCAGAGGTGAAATTCTTG 361 Query 184 GATTT 188 ||||| Sbjct 362 GATTT 366 >seq170138 Length=482 Score = 141 bits (156), Expect = 9e-32 Identities = 143/185 (77%), Gaps = 7/185 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69 || ||||||||||||||||||||| |||||||||||||| ||| |||||| | | ||| Sbjct 243 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGGGGCTTGAATACGTAAGCAT 184 Query 70 GGAATAATAGAATAGGAC------GTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 |||||||| ||||||||| || || ||||||||| |||||| |||||| | Sbjct 183 GGAATAATGGAATAGGACTTTGGTTTGTTGTGCTATTTTGTTGGTTTCCGGGACCG-AAG 125 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| | | || ||| ||||| | ||||| ||||| |||||||||||||| Sbjct 124 TAATGATTGAGAGAGACAGTTGGGGGCATTCGTATTTCGCTGTCAGAGGTGAAATTCTTG 65 Query 184 GATTT 188 ||||| Sbjct 64 GATTT 60 >seq215685 Length=346 Score = 82.4 bits (90), Expect = 8e-14 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC----CTTTGCTCGAATACATTACCA 68 ||||||||||||||||||||| ||||||||||||| | || ||||| || Sbjct 253 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGAAGCTGGCCTGAATAATGGTGCA 312 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 103 |||||||||||||||||| | ||||||||||||| Sbjct 313 TGGAATAATAGAATAGGATCT-CGGTTCTATTTTG 346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510744981120