Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq124393 221 3e-55 seq124392 210 5e-52 >seq124393 Length=272 Score = 221 bits (244), Expect = 3e-55 Identities = 188/229 (82%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 180 GGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTG 239 ||||| | |||||||||||||||| |||||||| | |||||||||||||||||| | || Sbjct 4 GGGCA-GCGGAATTCCTAGTGTAGGGGTGAAATCCATAGATATTAGGAGGAACATCGATG 62 Query 240 GCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACA 299 |||||||| ||| |||| | |||||| ||||||| ||||||||||||||||||||| Sbjct 63 GCGAAGGCAGCTGTCTGGCTTAATACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACA 122 Query 300 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATA 359 ||||||||||||||||||||||||||||||||||||| |||||| ||| ||| | | Sbjct 123 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGTTGTTGGGAGACTTG 182 Query 360 AGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || || || ||| ||||| ||||||| || ||||||||||| Sbjct 183 ATCTCT-TAGTAACGAAGCTAACGCGATAAGTAGACCGCCTGGGGAGTA 230 >seq124392 Length=286 Score = 210 bits (232), Expect = 5e-52 Identities = 193/243 (79%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 166 CTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAG 225 ||||||| | | || || || ||||| | |||||||||||||||||||||| || | Sbjct 3 CTAGAGTACTGTAGAGGGGGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTG 62 Query 226 GAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGC 285 ||||| ||| |||||||||||||| |||||| | ||||||||| || ||||||| Sbjct 63 AAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAGATACTGACACTCAGATGCGAAAGC 122 Query 286 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 123 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGT 182 Query 346 TGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGA 405 ||| ||| | | | || || || ||| ||||| ||||||| || |||||||| Sbjct 183 TGTTGGGAGACTTGATCTCT-TAGTAACGAAGCTAACGCGATAAGTAGACCGCCTGGGGA 241 Query 406 GTA 408 ||| Sbjct 242 GTA 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200155567104