Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq215681 634 2e-179 seq215683 605 9e-171 seq215682 605 9e-171 seq170134 414 3e-113 seq170133 369 1e-99 seq170136 266 1e-68 seq170135 176 1e-41 >seq215681 Length=967 Score = 634 bits (702), Expect = 2e-179 Identities = 457/523 (87%), Gaps = 21/523 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| || |||||||||| ||||| ||| |||||||| Sbjct 926 GTACTCATTCCAATTACAAGACTTGGAAAAGCCCTGTATTGTTATTTCTTGGCACTACCT 867 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 866 CCCTGAGTCAGTATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 807 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 806 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCGACCATGGTA 747 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG--G 238 ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct 746 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 687 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-------GAGCCCCGAAG 291 || | |||| ||||||||| | ||||| |||||||||||||| | |||| || Sbjct 686 CTAAGGGCCCTGCGATTCGATCAGTTACTATGAATCACCAAGGGGGACCGGGCCCGTGAG 627 Query 292 G----GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG---AAGTCGGGGTTTTTAG 344 | || ||||||||| |||||||||||||| |||||||| ||||||| | || | Sbjct 626 GACCCGCATTGGTTTTTGATCTAATAAATACATCCCTTCCGTCACAGTCGGGACTCTTCG 567 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA--GGTACTATCAAATAAA 402 |||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct 566 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAACGGTACAATCAAATAAA 507 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGAC 461 ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| Sbjct 506 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTACTAG--TGCTTATACTTAGAC 449 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 406 >seq215683 Length=631 Score = 605 bits (670), Expect = 9e-171 Identities = 450/523 (86%), Gaps = 19/523 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| || |||||||||| ||||| ||| |||||||| Sbjct 590 GTACTCATTCCAATTACAAGACTTGGAAAAGCCCTGTATTGTTATTTCTTGGCACTACCT 531 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 530 CCCTGAGTCAGTATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 471 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 470 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCGACCATGGTA 411 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG--G 238 ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct 410 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 351 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-------GAGCCCCGAAG 291 || | |||| ||||||||| | ||||| |||||||||||||| | |||| || Sbjct 350 CTAAGGGCCCTGCGATTCGATCAGTTACTATGAATCACCAAGGGGGACCGGGCCCGTGAG 291 Query 292 G----GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG---AAGTCGGGGTTTTTAG 344 | || ||||||||| |||||||||||||| |||||||| ||||||| | || | Sbjct 290 GACCCGCATTGGTTTTTGATCTAATAAATACATCCCTTCCGTCACAGTCGGGACTCTTCG 231 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA--GGTACTATCAAATAAA 402 |||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct 230 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAACGGTACAATCAAATAAA 171 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTATACTTAGAC 461 |||||||||||||||||||||||||||||| |||| || ||| | |||||||| || Sbjct 170 CGATAACTGATTTAATGAGCCATTCGCAGTCTCACGGTGCAAGAGCGTTTATACTTGCAC 111 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||| |||||||||||||||||||||||||||||| Sbjct 110 ATGCATGGCTTAGTCTTTGAGACAAGCATATGACTACTGGCAG 68 >seq215682 Length=833 Score = 605 bits (670), Expect = 9e-171 Identities = 450/523 (86%), Gaps = 19/523 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| || |||||||||| ||||| ||| |||||||| Sbjct 792 GTACTCATTCCAATTACAAGACTTGGAAAAGCCCTGTATTGTTATTTCTTGGCACTACCT 733 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 732 CCCTGAGTCAGTATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 673 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 672 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCGACCATGGTA 613 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG--G 238 ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct 612 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 553 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-------GAGCCCCGAAG 291 || | |||| ||||||||| | ||||| |||||||||||||| | |||| || Sbjct 552 CTAAGGGCCCTGCGATTCGATCAGTTACTATGAATCACCAAGGGGGACCGGGCCCGTGAG 493 Query 292 G----GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG---AAGTCGGGGTTTTTAG 344 | || ||||||||| |||||||||||||| |||||||| ||||||| | || | Sbjct 492 GACCCGCATTGGTTTTTGATCTAATAAATACATCCCTTCCGTCACAGTCGGGACTCTTCG 433 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA--GGTACTATCAAATAAA 402 |||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct 432 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAACGGTACAATCAAATAAA 373 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTATACTTAGAC 461 |||||||||||||||||||||||||||||| |||| || ||| | |||||||| || Sbjct 372 CGATAACTGATTTAATGAGCCATTCGCAGTCTCACGGTGCAAGAGCGTTTATACTTGCAC 313 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||| |||||||||||||||||||||||||||||| Sbjct 312 ATGCATGGCTTAGTCTTTGAGACAAGCATATGACTACTGGCAG 270 >seq170134 Length=369 Score = 414 bits (458), Expect = 3e-113 Identities = 311/361 (86%), Gaps = 21/361 (6%) Strand=Plus/Plus Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||||| ||||||||| ||||||| | ||||||||| ||||||||||||||||||||| Sbjct 3 CCCGTTGCGACCATGGTAAGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTG 62 Query 223 AATGAACCATCGCCG--GCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280 |||||| |||||||| ||| | |||| ||||||||| | ||||| |||||||||||||| Sbjct 63 AATGAAACATCGCCGGCGCTAAGGGCCCTGCGATTCGATCAGTTACTATGAATCACCAAG 122 Query 281 -------GAGCCCCGAAGG----GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG- 328 | |||| ||| || ||||||||| |||||||||||||| |||||||| Sbjct 123 GGGGACCGGGCCCGTGAGGACCCGCATTGGTTTTTGATCTAATAAATACATCCCTTCCGT 182 Query 329 --AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 386 ||||||| | || ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 183 CACAGTCGGGACTCTTCGCATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAA 242 Query 387 --GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TA 443 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 243 ACGGTACAATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTACTA 302 Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 G--TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 360 Query 504 G 504 | Sbjct 361 G 361 >seq170133 Length=382 Score = 369 bits (408), Expect = 1e-99 Identities = 309/375 (82%), Gaps = 19/375 (5%) Strand=Plus/Plus Query 148 CCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGA 207 |||||||| |||| |||||||| ||||||||||||||||| | |||||||||||||||| Sbjct 1 CCTAATTCTCCGTCACCCGTTGCAACCATGGTAGGCCACTACCGTACCATCGAAAGTTGA 60 Query 208 TAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATT 267 ||||||||||| ||||||||| |||||||||| | |||||||||||||| ||||| Sbjct 61 TAGGGCAGAAACTTGAATGAATCATCGCCGGCACTGGGCCATGCGATTCGAGCAGTTACC 120 Query 268 ATGAATCACCA-------AGGAGCCCCGAAGG-------GCGTTGGTTTTTTATCTAATA 313 ||||||||||| || ||||| ||| ||| ||||||| |||||||| Sbjct 121 ATGAATCACCAGAGGTCCGGGCACCCCGGAGGGAAACCCGCGCTGGTTTTGGATCTAATA 180 Query 314 AATAC-ACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACG 370 ||||| ||| |||||| ||||||| || ||||||||||||||||||||||||||| Sbjct 181 AATACGTCCCATTCCGAGCAGTCGGGACCTTCTGCATGTATTAGCTCTAGAATTACCACG 240 Query 371 GTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCA 430 |||||||| |||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct 241 GTTATCCAAGTAG-CAGCCACCATCAAATAAACTCTAACTGATTTAATGAGCCATTCGCA 299 Query 431 GTTTCACTGT-ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 || |||| || ||| | |||||||| |||||||||||||| ||||||||||||||| Sbjct 300 GTCTCACGGTGCAAGAGCGTTTATACTTGCACATGCATGGCTTAGTCTTTGAGACAAGCA 359 Query 490 TATGACTACTGGCAG 504 ||||||||||||||| Sbjct 360 TATGACTACTGGCAG 374 >seq170136 Length=246 Score = 266 bits (294), Expect = 1e-68 Identities = 210/247 (85%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 195 CATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA-GGCCATGCGA 253 |||||| ||||||||||||||||||||||||||| || || |||| ||| |||| | || Sbjct 1 CATCGACAGTTGATAGGGCAGAAATTTGAATGAAGCACCGTCGGCGCAAAGGCCGTACGG 60 Query 254 TTCGTTAAGTTATTATGAATCACCAAGGAGCC----CCGAAGG---GCGTTGGTTTTTTA 306 |||| |||||| ||||||||||||| | || |||||| ||| |||||| | Sbjct 61 TTCGAGCAGTTATCATGAATCACCAAGCAACCGGGCCCGAAGACCCGCGCCGGTTTTGGA 120 Query 307 TCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 365 ||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||| Sbjct 121 TCTAATAAATACATCCCTTCCAGAAGTCGGGACTTTCTGCATGTATTAGCTCTAGAATTA 180 Query 366 CCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 ||||||||||||||||||| ||| || ||||||||||| ||||||||||||||||||||| Sbjct 181 CCACGGTTATCCATGTAGT-AGGAACCATCAAATAAACTATAACTGATTTAATGAGCCAT 239 Query 426 TCGCAGT 432 ||||||| Sbjct 240 TCGCAGT 246 >seq170135 Length=292 Score = 176 bits (194), Expect = 1e-41 Identities = 213/281 (76%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 232 TCGCCGGCTC-AAGGCCATGCGATTCGTTAA--GTTATTATGAATCACCAAGGAGCCCCG 288 ||||||| | ||| ||||||||| | | ||||| ||||||||| | || | | Sbjct 8 TCGCCGGTGCCAAGACCATGCGATCAGCACAAGGTTATCCAGAATCACCAGGAAGACGGG 67 Query 289 ---AAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTT-TAG 344 ||| |||| | |||| ||||||||||| | ||||| | ||||| ||| ||| | | Sbjct 68 CGCAAGCCCGTTTGGTTTTGATCTAATAAATGCGCCCCTCTC-AAGTCAGGGCTTTGTTG 126 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAAC 403 ||||||||||||| ||||||||| | |||||||| ||| | | | ||||| | | | Sbjct 127 CATGTATTAGCTCCAGAATTACCGCAGTTATCCAAGTA--ACTGAATCTATCCAGTGCAT 184 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 | |||||||||||||||||||| ||||||| || | || |||||||||| Sbjct 185 TAGGTGTGATTTAATGAGCCATTCGCGGTTTCACCATACTGGG-GCACGCACTTAGACAT 243 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||| Sbjct 244 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1506578265088