Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq110109 87.8 7e-12 seq75198 87.8 7e-12 >seq110109 Length=472 Score = 87.8 bits (96), Expect = 7e-12 Identities = 95/121 (79%), Gaps = 5/121 (4%) Strand=Plus/Minus Query 331838 TGGATGATGAGTTTGGCACACTCATTGCAAGGAAAGAGAACTACATAGATCTTAC-TTCC 331896 |||||||||||||||||||||||||| ||||||||||| |||||| || |||| || Sbjct 371 TGGATGATGAGTTTGGCACACTCATTACAAGGAAAGAGTGTTACATACATTTTACAATCT 312 Query 331897 CTTA-ATCTTGC--CCTGACTGTTGAGGATGGCGTTCATCTCTGCATGACAAACATAAGG 331953 | | ||| || ||| |||||| ||||||||| |||||||||| |||||| || Sbjct 311 CGCACATC-AGCAGACTGCTTGTTGATGATGGCGTTGTACTCTGCATGAACAACATATGG 253 Query 331954 A 331954 | Sbjct 252 A 252 >seq75198 Length=563 Score = 87.8 bits (96), Expect = 7e-12 Identities = 95/121 (79%), Gaps = 5/121 (4%) Strand=Plus/Plus Query 331838 TGGATGATGAGTTTGGCACACTCATTGCAAGGAAAGAGAACTACATAGATCTTAC-TTCC 331896 |||||||||||||||||||||||||| ||||||||||| |||||| || |||| || Sbjct 365 TGGATGATGAGTTTGGCACACTCATTACAAGGAAAGAGTGTTACATACATTTTACAATCT 424 Query 331897 CTTA-ATCTTGC--CCTGACTGTTGAGGATGGCGTTCATCTCTGCATGACAAACATAAGG 331953 | | ||| || ||| |||||| ||||||||| |||||||||| |||||| || Sbjct 425 CGCACATC-AGCAGACTGCTTGTTGATGATGGCGTTGTACTCTGCATGAACAACATATGG 483 Query 331954 A 331954 | Sbjct 484 A 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1878775746726004