Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09-
07] 253,028 sequences; 167,153,529 total letters
Query= NC_032877.1
Length=10481
Score E
Sequences producing significant alignments: (Bits) Value
seq215538 93.3 3e-15
seq215535 93.3 3e-15
seq215534 93.3 3e-15
seq215533 93.3 3e-15
seq215532 93.3 3e-15
seq107421 80.6 2e-11
seq107420 80.6 2e-11
>seq215538
Length=909
Score = 93.3 bits (102), Expect = 3e-15
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 5651 TCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAAGTTAAGAT 5710
||| ||| | |||||||||||| |||| |||||||| | || || | || || ||
Sbjct 16 TCCGACTATTTGGATTGATACACTGAAGGATGAACGCCGTCCAATAGCAAAGGTGAATGC 75
Query 5711 TGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCCAGGAAATA 5770
||| || || ||||| |||||||| ||||||||| | | | || | ||||| ||
Sbjct 76 TGGGAAGACACGTGTGTTTGCTGCAGGACCTATGATATATACTCTTATTTTTAGGAAGTA 135
Query 5771 CTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|| | | || |||| || ||| ||||| | ||||||||||||| |||
Sbjct 136 CTTCTTGGGTTTTTCAGCGCACGTGGCTAGACATCGTATCAATAACGAA 184
>seq215535
Length=4294
Score = 93.3 bits (102), Expect = 3e-15
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 5651 TCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAAGTTAAGAT 5710
||| ||| | |||||||||||| |||| |||||||| | || || | || || ||
Sbjct 16 TCCGACTATTTGGATTGATACACTGAAGGATGAACGCCGTCCAATAGCAAAGGTGAATGC 75
Query 5711 TGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCCAGGAAATA 5770
||| || || ||||| |||||||| ||||||||| | | | || | ||||| ||
Sbjct 76 TGGGAAGACACGTGTGTTTGCTGCAGGACCTATGATATATACTCTTATTTTTAGGAAGTA 135
Query 5771 CTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|| | | || |||| || ||| ||||| | ||||||||||||| |||
Sbjct 136 CTTCTTGGGTTTTTCAGCGCACGTGGCTAGACATCGTATCAATAACGAA 184
>seq215534
Length=4294
Score = 93.3 bits (102), Expect = 3e-15
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 5651 TCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAAGTTAAGAT 5710
||| ||| | |||||||||||| |||| |||||||| | || || | || || ||
Sbjct 16 TCCGACTATTTGGATTGATACACTGAAGGATGAACGCCGTCCAATAGCAAAGGTGAATGC 75
Query 5711 TGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCCAGGAAATA 5770
||| || || ||||| |||||||| ||||||||| | | | || | ||||| ||
Sbjct 76 TGGGAAGACACGTGTGTTTGCTGCAGGACCTATGATATATACTCTTATTTTTAGGAAGTA 135
Query 5771 CTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|| | | || |||| || ||| ||||| | ||||||||||||| |||
Sbjct 136 CTTCTTGGGTTTTTCAGCGCACGTGGCTAGACATCGTATCAATAACGAA 184
>seq215533
Length=4340
Score = 93.3 bits (102), Expect = 3e-15
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 5651 TCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAAGTTAAGAT 5710
||| ||| | |||||||||||| |||| |||||||| | || || | || || ||
Sbjct 16 TCCGACTATTTGGATTGATACACTGAAGGATGAACGCCGTCCAATAGCAAAGGTGAATGC 75
Query 5711 TGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCCAGGAAATA 5770
||| || || ||||| |||||||| ||||||||| | | | || | ||||| ||
Sbjct 76 TGGGAAGACACGTGTGTTTGCTGCAGGACCTATGATATATACTCTTATTTTTAGGAAGTA 135
Query 5771 CTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|| | | || |||| || ||| ||||| | ||||||||||||| |||
Sbjct 136 CTTCTTGGGTTTTTCAGCGCACGTGGCTAGACATCGTATCAATAACGAA 184
>seq215532
Length=4340
Score = 93.3 bits (102), Expect = 3e-15
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 5651 TCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAAGTTAAGAT 5710
||| ||| | |||||||||||| |||| |||||||| | || || | || || ||
Sbjct 16 TCCGACTATTTGGATTGATACACTGAAGGATGAACGCCGTCCAATAGCAAAGGTGAATGC 75
Query 5711 TGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCCAGGAAATA 5770
||| || || ||||| |||||||| ||||||||| | | | || | ||||| ||
Sbjct 76 TGGGAAGACACGTGTGTTTGCTGCAGGACCTATGATATATACTCTTATTTTTAGGAAGTA 135
Query 5771 CTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|| | | || |||| || ||| ||||| | ||||||||||||| |||
Sbjct 136 CTTCTTGGGTTTTTCAGCGCACGTGGCTAGACATCGTATCAATAACGAA 184
>seq107421
Length=635
Score = 80.6 bits (88), Expect = 2e-11
Identities = 124/177 (70%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 5643 GAAAGATATCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAA 5702
|||||| ||| ||| | |||||||| || ||||||||||| || | || || | ||
Sbjct 635 GAAAGACTTCCGACTATATGGATTGACACGTTGAAAGATGAGCGCCGTCCAATAGCAAAG 576
Query 5703 GTTAAGATTGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCC 5762
|| || ||| || || ||||| |||||||| || || ||| | | | | |
Sbjct 575 GTAAATGCTGGGAAGACACGTGTGTTTGCTGCGGGGCCCATGATATATACTCTCATTTTT 516
Query 5763 AGGAAATACTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|||||||| | | | || |||| || ||| | ||| ||||||||||||||||||
Sbjct 515 AGGAAATATTTCTTGGGTTTTTCAGCGCACGTAGCTAGGAATCGTATCAATAATGAA 459
>seq107420
Length=897
Score = 80.6 bits (88), Expect = 2e-11
Identities = 124/177 (70%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 5643 GAAAGATATCCAACTGTGTGGATTGATACATTGAAAGATGAACGTAGACCCATTGAGAAA 5702
|||||| ||| ||| | |||||||| || ||||||||||| || | || || | ||
Sbjct 897 GAAAGACTTCCGACTATATGGATTGACACGTTGAAAGATGAGCGCCGTCCAATAGCAAAG 838
Query 5703 GTTAAGATTGGAAAAACTCGTGTTTTTGCTGCTGGACCTATGGATTTCATTGTTTGTGCC 5762
|| || ||| || || ||||| |||||||| || || ||| | | | | |
Sbjct 837 GTAAATGCTGGGAAGACACGTGTGTTTGCTGCGGGGCCCATGATATATACTCTCATTTTT 778
Query 5763 AGGAAATACTACCTTGGATTTTGTGCTCACTTGGCTGAAAATCGTATCAATAATGAA 5819
|||||||| | | | || |||| || ||| | ||| ||||||||||||||||||
Sbjct 777 AGGAAATATTTCTTGGGTTTTTCAGCGCACGTAGCTAGGAATCGTATCAATAATGAA 721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 33328856411440
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |