Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq70007 201 2e-49 seq163081 105 1e-20 seq169548 100 4e-19 seq169547 100 4e-19 seq120458 100 4e-19 seq120457 100 4e-19 seq110294 96.9 5e-18 seq110293 96.9 5e-18 seq141326 95.1 2e-17 seq141325 95.1 2e-17 seq170700 87.8 3e-15 seq170699 84.2 3e-14 seq5524 75.2 2e-11 >seq70007 Length=2599 Score = 201 bits (222), Expect = 2e-49 Identities = 205/258 (79%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||| | Sbjct 368 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 425 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| ||| ||||||| |||| ||||||| | ||||| | | |||| | ||| Sbjct 426 CTCGTTCAAGGGAAACAATTACAATTCCCTATCCCTAGCACGAAGGAGGTTCATCGGATT 485 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| | |||| ||||| || | | | || ||| | | ||||||||| |||||||| Sbjct 486 GCCCAGGCCTGGTGGCCAGGGAGGCAACGCCCGCTGATTCCTTCAGTGTAGTGCGCGTGC 545 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||| | |||||||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct 546 GGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGTGG-CTAAA 603 Query 239 AGGC-CATCTCCCTCGAA 255 | | | | |||||| || Sbjct 604 CGCCACTTGTCCCTCTAA 621 >seq163081 Length=112 Score = 105 bits (116), Expect = 1e-20 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||| Sbjct 25 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAA-TTC 82 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 |||||| ||| ||||||| |||| Sbjct 83 CTCGTTCAAGGGAAACAATTACAAT 107 >seq169548 Length=109 Score = 100 bits (110), Expect = 4e-19 Identities = 87/104 (84%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 153 TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 212 ||| | | ||||||||||||||||||||||| | ||||||||||||||||||| |||||| Sbjct 2 TGATTCCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGGCCTGTT 61 Query 213 ATTGCCTCAAACTTCCGTGGCCTAAAAGGC-CATCTCCCTCGAA 255 |||| ||||| || ||||| ||||| | | | | |||||| || Sbjct 62 ATTG-CTCAATCTCGCGTGG-CTAAACGCCACTTGTCCCTCTAA 103 >seq169547 Length=109 Score = 100 bits (110), Expect = 4e-19 Identities = 87/104 (84%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 153 TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 212 ||| | | ||||||||||||||||||||||| | ||||||||||||||||||| |||||| Sbjct 2 TGATTCCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGCCCTGTT 61 Query 213 ATTGCCTCAAACTTCCGTGGCCTAAAAGGC-CATCTCCCTCGAA 255 |||| ||||| || ||||| ||||| | | | | |||||| || Sbjct 62 ATTG-CTCAATCTCGCGTGG-CTAAACGCCACTTGTCCCTCTAA 103 >seq120458 Length=114 Score = 100 bits (110), Expect = 4e-19 Identities = 77/89 (87%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209 || ||| | | ||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 18 CGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCCGGGCATCTAAGGGCATCACAGACCT 77 Query 210 GTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||||| ||||| || ||||| ||||| Sbjct 78 GTTATTG-CTCAATCTCGCGTGG-CTAAA 104 >seq120457 Length=114 Score = 100 bits (110), Expect = 4e-19 Identities = 77/89 (87%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209 || ||| | | ||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 18 CGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCCGGCCATCTAAGGGCATCACAGACCT 77 Query 210 GTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||||||| ||||| || ||||| ||||| Sbjct 78 GTTATTG-CTCAATCTCGCGTGG-CTAAA 104 >seq110294 Length=110 Score = 96.9 bits (106), Expect = 5e-18 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGC 174 |||| ||| | |||| |||||| || | | | || ||| | | || ||||||||||| Sbjct 6 GATTGCCCAGGCCTGGCGGCCAGGGAGGCAACGCCCGCTGATTCCTTCGGTGTAGCGCGC 65 Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 66 GTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 108 >seq110293 Length=110 Score = 96.9 bits (106), Expect = 5e-18 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGC 174 |||| ||| | |||| |||||| || | | | || ||| | | || ||||||||||| Sbjct 6 GATTGCCCAGGCCTGGCGGCCAGGGAGGCAACGCCCGCTGATTCCTTCCGTGTAGCGCGC 65 Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 66 GTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 108 >seq141326 Length=109 Score = 95.1 bits (104), Expect = 2e-17 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209 || ||| | | ||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct 29 CGCTGATTCCTTCAGTGTAGCGCGCGGGCGGCCCCGGACATCTAAGGGCATCACAGACCT 88 Query 210 GTTATTGCCTCAAACTTCCGTG 231 ||||||| ||||| || |||| Sbjct 89 GTTATTG-CTCAATCTCGCGTG 109 >seq141325 Length=109 Score = 95.1 bits (104), Expect = 2e-17 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209 || ||| | | ||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct 29 CGCTGATTCCTTCAGTGTAGCGCGCGCGCGGCCCCGGACATCTAAGGGCATCACAGACCT 88 Query 210 GTTATTGCCTCAAACTTCCGTG 231 ||||||| ||||| || |||| Sbjct 89 GTTATTG-CTCAATCTCGCGTG 109 >seq170700 Length=110 Score = 87.8 bits (96), Expect = 3e-15 Identities = 89/112 (79%), Gaps = 3/112 (3%) Strand=Plus/Plus Query 24 AACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCA 83 ||||||||||| |||||||||||||||| |||||| ||||||| ||| |||||||||| Sbjct 1 AACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-CCTCGTTCAAGGGAAACAATTGCA 58 Query 84 ATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGG 134 || ||||||| | ||||| | | |||| |||| ||| | |||| ||| Sbjct 59 ATTCCCTATCCCTAGCACGAAGGAGGTTCATCGGATTGCCCAGGCCTGGCGG 110 >seq170699 Length=110 Score = 84.2 bits (92), Expect = 3e-14 Identities = 88/112 (79%), Gaps = 3/112 (3%) Strand=Plus/Plus Query 24 AACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCA 83 ||||||||||| |||||||||||||||| |||| ||||||||| ||| ||||||| || Sbjct 1 AACGCGAGCTT-ATGACTCGCGCTTACTGGGAA-TTCCTCGTTCAAGGGAAACAATTCCA 58 Query 84 ATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGG 134 || ||||||| | ||||| | | |||| |||| ||| | |||| ||| Sbjct 59 ATTCCCTATCCCTAGCACGAAGGAGGTTCATCGGATTGCCCAGGCCTGGCGG 110 >seq5524 Length=268983 Score = 75.2 bits (82), Expect = 2e-11 Identities = 108/145 (74%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCG 173 |||| ||| | |||| |||||| || | | || | | ||| | | ||||||||| ||| Sbjct 204011 GATTGCCCAGGCCTGGCGGCCAGGGAGGCA-ACGCCTGCTGATTCCTTCAGTGTAGTGCG 203953 Query 174 CGTGCGGCCCAGAACATCTAAGGGC--ATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||| ||||| | |||||||||||| |||||| ||||||||||| || || || ||| Sbjct 203952 TGTGAGGCCCCGGACATCTAAGGGCATATCACATACCTGTTATTG-CTAAATCTCATGTG 203894 Query 232 GCCTAAAAGGC-CATCTCCCTCGAA 255 | ||||| | | | | |||||| || Sbjct 203893 G-CTAAACGCCACTTGTCCCTCTAA 203870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750410012325