Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4911 95.1 7e-18 seq70007 89.7 3e-16 >seq4911 Length=268108 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| | |||| |||| || | Sbjct 217484 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGCCAGGTCATGGGAGTAACGCCGGCG 217543 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 217544 GATCGCCAGTCGGCATCGTTTATGGTTAGAACTAGGACGGTATCTGATCGTCTTCGA 217600 >seq70007 Length=2599 Score = 89.7 bits (98), Expect = 3e-16 Identities = 93/118 (79%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCC 59 |||||||||||||||| |||| || ||| |||| || | |||| |||| || | Sbjct 896 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCC-CGCTAGGTCATGGGAGTAACGCCGGC 954 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 955 GGATCGCCAGTCGGCATCGTTTATGGTTAGAACTA-GACGGTATCTGATCGTCTTCGA 1011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277830354450