Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq70007 203 6e-50 seq5088 187 5e-45 seq204989 105 1e-20 seq120743 100 5e-19 seq126846 86.0 1e-14 seq126845 86.0 1e-14 seq103096 78.8 2e-12 seq103095 78.8 2e-12 seq28760 75.2 2e-11 seq211684 73.4 7e-11 seq153608 73.4 7e-11 >seq70007 Length=2599 Score = 203 bits (224), Expect = 6e-50 Identities = 211/270 (78%), Gaps = 9/270 (3%) Strand=Plus/Minus Query 55 GTGCCGGGGA--GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT 112 ||||| ||| ||| | || ||||||||||||| |||||||||||||||||||||| Sbjct 1279 GTGCCAGGGGTGGCCGGAACGTTTACTTTGAAAACATTAGAGTGTTCAAAGCAGGCCGCC 1220 Query 113 GCTC--GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT 170 | | ||||| ||||||||||||| ||||||||| | |||||||||| ||||||| Sbjct 1219 ACGCCTGAATAGTCCAGCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTT 1161 Query 171 TCTAGGACCGCC--GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCA 228 | | ||| ||| ||||||||||| ||||| | |||||| || ||||| || | Sbjct 1160 T-TCGGAACGCGAGGTAATGATTAAGAGGGACTGACGGGGGCATCCGTATTGCGGCGTTA 1102 Query 229 GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGT 288 |||||||||||||| ||| ||||| ||| ||||||||||| || ||||| |||| Sbjct 1101 GAGGTGAAATTCTTAGATCGTCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGT 1042 Query 289 TTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||| ||||||||||||| || Sbjct 1041 TTTCATTAATCA-AGAACGAAAGTTAGAGG 1013 >seq5088 Length=338293 Score = 187 bits (206), Expect = 5e-45 Identities = 199/257 (77%), Gaps = 8/257 (3%) Strand=Plus/Minus Query 55 GTGCCGGGGA--GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT 112 ||||||||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct 232434 GTGCCGGGGGTGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCC 232375 Query 113 GCTC--GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT 170 | | ||||| ||||||||||||| ||||||||| | |||||||||| ||||||| Sbjct 232374 ACGCCTGAATAGTCCAGCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTT 232316 Query 171 TCTAGGACCGCC--GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCA 228 | | ||| ||| ||||||||||| ||||| | |||||| || ||||| || | Sbjct 232315 T-TCGGAACGCGAGGTAATGATTAAGAGGGACTGACGGGGGCATCCGTATTGCGGCGTTA 232257 Query 229 GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGT 288 ||||||||||||| ||| ||||| ||| ||||||||||| || ||||| |||| Sbjct 232256 GAGGTGAAATTCTCAGATCGTCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGT 232197 Query 289 TTTCATTAATCAGTGAA 305 ||||||||| ||||| Sbjct 232196 TTTCATTAAGGCGTGAA 232180 >seq204989 Length=124 Score = 105 bits (116), Expect = 1e-20 Identities = 101/125 (81%), Gaps = 6/125 (5%) Strand=Plus/Minus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGC--CTTTGCTCGAATACATTAGCATGGAATA 136 |||||||||||||||||||||||||||||| | || ||||| ||||||||||| Sbjct 124 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCCACGCCTGAATAGTCCAGCATGGAATA 65 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC--CGTAATGATTAAT 194 || ||||||||| | |||||||||| |||||||| | ||| ||| | ||||||||| Sbjct 64 ATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACGCGAGGGAATGATTAAG 7 Query 195 AGGGA 199 ||||| Sbjct 6 AGGGA 2 >seq120743 Length=124 Score = 100 bits (110), Expect = 5e-19 Identities = 100/125 (80%), Gaps = 6/125 (5%) Strand=Plus/Minus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGC--CTTTGCTCGAATACATTAGCATGGAATA 136 |||||||||||||||| ||||||||||||| | || ||||| ||||||||||| Sbjct 124 TTTGAAAAAATTAGAGGGTTCAAAGCAGGCCGCCACGCCTGAATAGTCCAGCATGGAATA 65 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC--CGTAATGATTAAT 194 || ||||||||| | |||||||||| |||||||| | ||| ||| | ||||||||| Sbjct 64 ATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACGCGAGGGAATGATTAAG 7 Query 195 AGGGA 199 ||||| Sbjct 6 AGGGA 2 >seq126846 Length=116 Score = 86.0 bits (94), Expect = 1e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 || ||||||||||||||| ||| ||||| ||| || |||||||| || ||||| Sbjct 101 GTTAGAGGTGAAATTCTTAGATCGTCGCAAGACGAACAACCGCGAAAGCATTTGCCAAGA 42 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| ||||||||||||| || Sbjct 41 ATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 9 >seq126845 Length=116 Score = 86.0 bits (94), Expect = 1e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 || ||||||||||||||| ||| ||||| ||| || |||||||| || ||||| Sbjct 101 GTTAGAGGTGAAATTCTTAGATCGTCGCAAGACGAACAACGGCGAAAGCATTTGCCAAGA 42 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| ||||||||||||| || Sbjct 41 ATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 9 >seq103096 Length=109 Score = 78.8 bits (86), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 4/96 (4%) Strand=Plus/Minus Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC--CG 183 ||||||||||||| ||||||||| | |||||||||| ||||| || | ||| ||| | Sbjct 96 AGCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGCTT-TCGGAACGCGAGG 39 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219 |||||||||| ||||| | |||||| || ||||| Sbjct 38 TAATGATTAAGAGGGACTGACGGGGGCATCCGTATT 3 >seq103095 Length=109 Score = 78.8 bits (86), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 4/96 (4%) Strand=Plus/Minus Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC--CG 183 ||||||||||||| ||||||||| | |||||||||| ||||| || | ||| ||| | Sbjct 96 AGCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGGTT-TCGGAACGCGAGG 39 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219 |||||||||| ||||| | |||||| || ||||| Sbjct 38 TAATGATTAAGAGGGACTGACGGGGGCATCCGTATT 3 >seq28760 Length=109 Score = 75.2 bits (82), Expect = 2e-11 Identities = 57/66 (86%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||| ||||||||||| || ||||| |||||||||||||||| |||||||||| Sbjct 106 AAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 48 Query 313 TAGGGG 318 ||| || Sbjct 47 TAGAGG 42 >seq211684 Length=116 Score = 73.4 bits (80), Expect = 7e-11 Identities = 51/57 (89%), Gaps = 2/57 (4%) Strand=Plus/Minus Query 55 GTGCCGGGGAG--CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 109 ||||||||| | || | || |||||||||||||||||||||||||||||||||||| Sbjct 72 GTGCCGGGGGGGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 16 >seq153608 Length=116 Score = 73.4 bits (80), Expect = 7e-11 Identities = 51/57 (89%), Gaps = 2/57 (4%) Strand=Plus/Minus Query 55 GTGCCGGGGA--GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 109 ||||||||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct 72 GTGCCGGGGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913202530240