Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq171513 96.9 2e-18 seq153998 96.9 2e-18 seq153997 96.9 2e-18 seq127471 96.9 2e-18 seq127470 96.9 2e-18 seq127469 96.9 2e-18 seq70007 91.5 9e-17 seq19896 78.8 6e-13 seq204577 77.0 2e-12 seq3035 77.0 2e-12 seq163081 75.2 7e-12 >seq171513 Length=111 Score = 96.9 bits (106), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 39 TCCGAA-GATCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 95 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 96 GGCAGGGACGTAAT 109 >seq153998 Length=121 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 36 TCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 92 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| | |||| |||| Sbjct 93 GGCAGGGACGTAAT-CCACGCGAGCT 117 >seq153997 Length=121 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 36 TCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 92 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| | |||| |||| Sbjct 93 GGCAGGGACGTAAT-CCACGCGAGCT 117 >seq127471 Length=114 Score = 96.9 bits (106), Expect = 2e-18 Identities = 73/81 (90%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 29 TCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 85 Query 99 GGCAGGGACGTAATACAACGC 119 |||||||||||||| |||||| Sbjct 86 GGCAGGGACGTAAT-CAACGC 105 >seq127470 Length=114 Score = 96.9 bits (106), Expect = 2e-18 Identities = 73/81 (90%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 29 TCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 85 Query 99 GGCAGGGACGTAATACAACGC 119 |||||||||||||| |||||| Sbjct 86 GGCAGGGACGTAAT-CAACGC 105 >seq127469 Length=114 Score = 96.9 bits (106), Expect = 2e-18 Identities = 73/81 (90%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 29 TCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 85 Query 99 GGCAGGGACGTAATACAACGC 119 |||||||||||||| |||||| Sbjct 86 GGCAGGGACGTAAT-CAACGC 105 >seq70007 Length=2599 Score = 91.5 bits (100), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 ||| ||||||| | || || || ||||||||| ||||||||||| ||||||||||||||| Sbjct 323 AAGATCTCACTCAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAG 380 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| |||||| |||| Sbjct 381 GGACGTAAT-CAACGCGAGCT 400 >seq19896 Length=111 Score = 78.8 bits (86), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 3/69 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||| |||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 46 TCCGAA-GATCTCCCTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 102 Query 99 GGCAGGGAC 107 ||||||||| Sbjct 103 GGCAGGGAC 111 >seq204577 Length=110 Score = 77.0 bits (84), Expect = 2e-12 Identities = 59/66 (89%), Gaps = 3/66 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||||||| ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 48 TCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 104 Query 99 GGCAGG 104 |||||| Sbjct 105 GGCAGG 110 >seq3035 Length=319369 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| ||||| |||||||||||||||||| |||||| ||| Sbjct 274105 CAATCGGTAGTA-GCGACGGGCGGTGTGTATAAAGGGCAGGGACGTAAT-CAACGCGAGC 274048 Query 124 T 124 | Sbjct 274047 T 274047 >seq163081 Length=112 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||| |||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 2 TCGGAAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300184520900