Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq70007 113 5e-23 seq5088 113 5e-23 seq204989 82.4 8e-14 seq120743 82.4 8e-14 >seq70007 Length=2599 Score = 113 bits (124), Expect = 5e-23 Identities = 136/180 (76%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC--CTTTGCTCGAATACATTACC 67 || ||||||||||||| ||||||| ||||||||||||| | || ||||| | | Sbjct 1261 ACGTTTACTTTGAAAACATTAGAGTGTTCAAAGCAGGCCGCCACGCCTGAATAGTCCAGC 1202 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAA 126 |||||||||| ||||||||| | |||||||||| || ||||| | ||| ||| |||| Sbjct 1201 ATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACGCGAGGTAA 1144 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| || | ||| | |||||| || ||||| || | ||||||||||||| ||| Sbjct 1143 TGATTAAGAGGGACTGACGGGGGCATCCGTATTGCGGCGTTAGAGGTGAAATTCTTAGAT 1084 >seq5088 Length=338293 Score = 113 bits (124), Expect = 5e-23 Identities = 133/175 (76%), Gaps = 5/175 (3%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC--CTTTGCTCGAATACATTACC 67 || ||||||||||||||||||||| ||||||||||||| | || ||||| | | Sbjct 232416 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCCACGCCTGAATAGTCCAGC 232357 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAA 126 |||||||||| ||||||||| | |||||||||| || ||||| | ||| ||| |||| Sbjct 232356 ATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACGCGAGGTAA 232299 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||| || | ||| | |||||| || ||||| || | |||||||||||| Sbjct 232298 TGATTAAGAGGGACTGACGGGGGCATCCGTATTGCGGCGTTAGAGGTGAAATTCT 232244 >seq204989 Length=124 Score = 82.4 bits (90), Expect = 8e-14 Identities = 96/125 (77%), Gaps = 5/125 (4%) Strand=Plus/Minus Query 18 TTTGAAAAAATTAGAGCGTTCAAAGCAGGC--CTTTGCTCGAATACATTACCATGGAATA 75 |||||||||||||||| ||||||||||||| | || ||||| | ||||||||| Sbjct 124 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCCACGCCTGAATAGTCCAGCATGGAATA 65 Query 76 ATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAATGATAAAT 134 || ||||||||| | |||||||||| || ||||| | ||| ||| | |||||| || Sbjct 64 ATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACGCGAGGGAATGATTAAG 7 Query 135 ACGGA 139 | ||| Sbjct 6 AGGGA 2 >seq120743 Length=124 Score = 82.4 bits (90), Expect = 8e-14 Identities = 96/125 (77%), Gaps = 5/125 (4%) Strand=Plus/Minus Query 18 TTTGAAAAAATTAGAGCGTTCAAAGCAGGC--CTTTGCTCGAATACATTACCATGGAATA 75 |||||||||||||||| ||||||||||||| | || ||||| | ||||||||| Sbjct 124 TTTGAAAAAATTAGAGGGTTCAAAGCAGGCCGCCACGCCTGAATAGTCCAGCATGGAATA 65 Query 76 ATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAATGATAAAT 134 || ||||||||| | |||||||||| || ||||| | ||| ||| | |||||| || Sbjct 64 ATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACGCGAGGGAATGATTAAG 7 Query 135 ACGGA 139 | ||| Sbjct 6 AGGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510917455200