Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq52847 77.0 5e-12 seq112280 73.4 6e-11 >seq52847 Length=2193 Score = 77.0 bits (84), Expect = 5e-12 Identities = 87/114 (76%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||| || | ||||| | ||| || | || | || | Sbjct 1771 GTACGAGAGGAACCGCAGA-TTCA-AACACTTGGTCTAGGCGCTTGGCCGATAGGCCAAT 1714 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| |||||| |||| || ||| | ||||||||||||||||| |||||| Sbjct 1713 GGTGCGAGGCTACCCTCTGGGGGCTTACGACTGAACGCCTCTAAGTCGGAATCC 1660 >seq112280 Length=439 Score = 73.4 bits (80), Expect = 6e-11 Identities = 86/114 (75%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| | ||||| | ||| || | || | || | Sbjct 119 GTACGAGAGGAACCGCAGA-TTCAGAC-ACTTGGTCTAGGCGCTTGGCCGATAGGCCAAT 62 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||| |||||| |||| || ||| | ||||||||||||||||| |||||| Sbjct 61 GGTGCGGGGCTACCCTCTGGGGGCTTACGACTGAACGCCTCTAAGTCGGAATCC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817467928320