Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq190700 111 1e-19 seq1679 95.1 1e-14 >seq190700 Length=4627 Score = 111 bits (122), Expect = 1e-19 Identities = 148/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||| || ||||| |||| |||||| ||| || || ||||| ||| || Sbjct 1862 TGTTCAATGCAATTGAGACTTTACCTTGTGTGAAGAAGAAGGCAGACTGGGCACTCAGTT 1803 Query 61457 GGATCACCAGT-ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||| | | | |||| | | | ||||||||| | |||||||||| | || ||| Sbjct 1802 GGATAAACTCTGACAATGCATGT-TATGGTGAACGCATCGTGGCATTTGCTGCAGTTGAG 1744 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || || |||||| ||||| ||||||| ||||||||||||||||| || ||| Sbjct 1743 GGAATCTTCTTTTCTGGATCATTTGCATCAATCTTCTGGTTGAAGAAACGTGGTCTCATG 1684 Query 61576 CCCGGTCTGACCTTCAGCAATGA 61598 || || |||| ||| |||||| Sbjct 1683 CCTGGCTTGACTTTCTCCAATGA 1661 Score = 105 bits (116), Expect = 5e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| ||| | ||| || || | ||||| || | || || || || ||| | | Sbjct 2897 ATGAACCACTACTCAGAGAAAACCCAAGGCGTTTTGTCATATTTCCAATTGAATATCATG 2838 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 |||| |||| ||||||||||| |||||||| || || ||||||| ||||| || |||| Sbjct 2837 ATATCTGGCAGATGTACAAAAAAGCGGAAGCGTCATTTTGGACGGCTGAGGAAGTAGATT 2778 Query 61145 TGTCCAAAGACATGAATGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 |||| || ||| ||| | |||| || | | || | |||| ||||| ||| | Sbjct 2777 TGTCAAAGGACTTGATCCATTGGGAAGGCCTGAAAGA-TGATGAAAGGCATTTTATTTCA 2719 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT 61253 ||||| ||||| || ||||| || || || || |||||||| || || Sbjct 2718 CATGTATTGGCTTTTTTTGCTGCAAGTGATGGCATTGTCAATGAAAACTT 2669 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||||||||| | || || ||||||||||| || ||||| ||||| || || || Sbjct 2422 CAGGAGGTGCAAGTAACAGAAGCACGTTGTTTCTATGGTTTCCAAATTGCAATAGAAAAC 2363 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||| || || ||||||||| | || || || || ||||||||||| Sbjct 2362 ATCCATTCTGAAATGTACAGTTTGCTTATTGACACATACATCAGGGA 2316 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761 ||||| || || | || ||||||||||| ||||| ||||| || || || || || || Sbjct 1231 CGTGATGCAGTGAAGATAGAACAGGAATTCCTGACAGACGCCTTACCTGTATCGCTGATT 1172 Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 || |||||| ||| ||| |||||| |||||||||||||||||| Sbjct 1171 GGAATGAATGCCACACTCATGCAGCAGTACATTGAATTTGTTGCCGAC 1124 >seq1679 Length=151814 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 || ||||| || ||| ||| | ||| |||| | ||||||||||| || ||| || Sbjct 43421 TCTCCCCACACATCGTGCAGCCCTGGGCACTCATTTGGACACATCAACGTCCAGTCTTTG 43362 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | || ||||| ||| || || || || ||||| ||||| |||||||| || | Sbjct 43361 TTGGCCTCCACACGCTTCATGAAGAGGTCGGGAATCCACAGGGCATAGAAGAGGTCCCTG 43302 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGC--GCAAGTCGAGGAACTCAAAGATGTCGG 66440 |||| ||||| || | || ||| || ||| || ||||| ||||||||||| | Sbjct 43301 GCTCTCTGCTCGTCCTTTCCAGTATTCTTCTTGGCA--TCCAGGAATTCAAAGATGTCCG 43244 Query 66441 CATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||||| ||||||||||| || || || Sbjct 43243 CATGCCAGGGTTCCAGGTAAATTGCAAA 43216 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || || ||||||||||| || || || ||||| || || |||| ||||| || || Sbjct 45895 TATTCCACAATTTCGGTACAGAGGTTGCTGCACTTGATAGTTCCCAGGTTCTGCTGGTTT 45836 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 || | ||||| ||||||||||| | ||| ||||||||||| || ||| || | Sbjct 45835 GATTTCCTGTTGCAGGCATCCTTGTAAAGCATATACGGAGTGCCCGTTTCAGTCTGAGCT 45776 Query 66173 TCAATGATGGCGTGCCAAAG 66192 ||||||||||| | ||| || Sbjct 45775 TCAATGATGGCATACCACAG 45756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396510475953200