Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq704 181 4e-43 seq2285 125 3e-26 >seq704 Length=136093 Score = 181 bits (200), Expect = 4e-43 Identities = 121/135 (90%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || |||||||||||||||||||||||||||||| || |||| |||| Sbjct 31084 GAGCAAGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCCGAGTAGGACGAAG 31025 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| | Sbjct 31024 CCAGAGGAAACTCTGGTGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCAAACT 30965 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 30964 TGGGTATAGGGGCGA 30950 >seq2285 Length=5733 Score = 125 bits (138), Expect = 3e-26 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct 5709 GTTGGGACCCGAAAGATGGTGAACTATGCGAGGCGAGGTCGAAGCCAGAGGAAACTCTGG 5650 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| | ||||||||| ||||||||| ||||||| | | |||||||||||| Sbjct 5649 TGGAGGACTGTAGCGGTTCTAACGTGCAAATTGATCGTCGCAGCTTCGTATAGGGGCGA 5591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079896546650