Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3013 158 3e-36 >seq3013 Length=560567 Score = 158 bits (174), Expect = 3e-36 Identities = 234/329 (71%), Gaps = 7/329 (2%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 |||||||| ||||| ||| ||||||||| ||||||||| || ||| |||| ||||| Sbjct 294253 GAATAAGCGCCGGCCAACCTTGTGCCAGCAACCGCGGTAAGACAAGGGGCGCAAACGTTA 294194 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT--GAAATC 128 |||| | | |||| ||||| ||||| ||| | |||| |||| | | ||| | || | Sbjct 294193 CTCGGTTTCAATGGGTTTAAAGGGTGCGTAGGTGTTTGTATAAGTCTGATGTTTGGAAGC 294134 Query 129 CCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGG 188 || |||| ||| || |||| |||| || | | ||| | || | Sbjct 294133 A----GCATAACTGAAGAAAGGCGTTTGATACTGTACAAATTGAGATTAATGGAAGTTAA 294078 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 ||||||| |||||| ||||||| |||||||| | |||||||||| |||||||| Sbjct 294077 TGGAATTTTTAGTGTAGAGGTGAAATTCGTAGATACTAGAAGGAACACCAGGGGCGAAGG 294018 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 | || ||| ||||| || | |||||||||||||||||| ||| |||||||| Sbjct 294017 CGATTAACTATTTTAAT-CTGACACTGAGGCACGAAAGCGTGGGGAGTAAAAAGGATTAG 293959 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGAT 337 | ||||| ||| ||||||||||||| ||| Sbjct 293958 AGACCCTTGTAATCCACGCCCTAAAAGAT 293930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289537802592