Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3013 140 8e-31 >seq3013 Length=560567 Score = 140 bits (154), Expect = 8e-31 Identities = 194/270 (72%), Gaps = 14/270 (5%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| | ||| | || || ||||||||| ||| | | |||||||| | ||||| Sbjct 281624 GCATTTGCACGGAGAATTAAATTTCACTAAGTTGATGTTAAAGACAGCGAGACAGTCGTT 281683 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | |||||| |||||||| | ||| ||||| |||||||||||||||||||| ||| Sbjct 281684 AAACCATTCATGCAGGTCACCAATTATGTGACAATGAATTTCGCTACCTTAGGACGATTA 281743 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTA-ACCCCAT 191 | |||| ||||||||||| ||||| || ||| ||||| || | || Sbjct 281744 TAGTTATCGCCGCCGTTTATTCTGGCTT--ATAGTGAG---------AGCTATACACAAT 281792 Query 192 CA--ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 || || |||| ||||||||||| ||| |||||||||||| ||| || |||| Sbjct 281793 CACTTTTGACCTCAGAACACCGGGCAGGTCTCAGACCCTATACGTCATCTTACGATTTTG 281852 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||| || |||||||||| |||||||||||| Sbjct 281853 CAGGGTCCTGTGTTTTTGATAAACAGTCGC 281882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260739191616