Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq3013 131 4e-28 >seq3013 Length=560567 Score = 131 bits (144), Expect = 4e-28 Identities = 251/364 (69%), Gaps = 26/364 (7%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||| | ||| | || | |||||||| ||| || | |||||| | | ||||| Sbjct 281624 GCATTTGCACGGAGAATTAAATTTCACTAAGTTGATGTTAAAGACAGCGAGACAGTCGTT 281683 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 | || ||| ||| |||| | ||| ||||| |||||||||||||||||||| ||| Sbjct 281684 AAACCATTCATGCAGGTCACCAATTATGTGACAATGAATTTCGCTACCTTAGGACGATTA 281743 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTA-AGTTCACTGCTTCGATTGCTCTA-ACAGAT 184 |||||| ||||||||||| | |||||| ||| || ||| || ||| || Sbjct 281744 TAGTTATCGCCGCCGTTTATTCTGGCTTATAGT----------GAGAGCTATACACA-AT 281792 Query 185 C-CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | | || |||| | ||||||||||| |||| ||||||| || |||| ||| || | Sbjct 281793 CACTTTTGACCTCAGAACACCGGGCAGGTCTCAGACCCTATACGTCATCTTACGATTTTG 281852 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG------CGGCC--- 294 ||| |||||||||||| |||||||||||| || ||| | || | ||| Sbjct 281853 CAGGGTCCTGTGTTTTTGATAAACAGTCGCTATCTCCGATTTTGTGTCCCCTCAGCCAGG 281912 Query 295 -TGTCATAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC-TT 351 || | | ||| ||| | | || ||| || ||||| | | || |||||||| |||| || Sbjct 281913 TTGCCCTGGACAAGGGCCTCTTTTTCCATACGTTACAGAGGCAATTTGCCGAATTCCTTT 281972 Query 352 AACA 355 |||| Sbjct 281973 AACA 281976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062348760448