Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3013 196 1e-47 >seq3013 Length=560567 Score = 196 bits (216), Expect = 1e-47 Identities = 357/513 (70%), Gaps = 35/513 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| || ||||||||||||||||||||| | |||||||| |||||| ||| Sbjct 293856 TACGATCGCAAGATTAAAACTCAAAGGAATTGACGGGAGCTCGCACAAGTGGTGGAACAT 293797 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCT-GACCCCT 119 |||||||||| ||| | | ||||||| |||||||| |||||||| || | ||| Sbjct 293796 GTGGTTTAATACGATGGTCCTCGAAGAATCTTACCAACCCTTGACATGCTATTGAC---- 293741 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGA-----GTGACAGGTGATGCATGGTTGT 174 | || | | | | ||| | | ||| || ||||||| ||||||| ||| Sbjct 293740 --AAAGTAGGCAACTACTCTTTCTAGCAATAGACAATAGT-ACAGGTGTTGCATGGCTGT 293684 Query 175 CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTT 234 |||| ||||||||||||| || | || ||| | ||||| || ||||| | | | | Sbjct 293683 TTTCAGTTCGTGTCGTGAGACGTATGATTCAGTTCTTTAACGAACGAAACCCCTGATCCT 293624 Query 235 AGTTGCCATCAT-TAAGTTGG---GCACTCTAAG----------TTGACTGCCGGTGACA 280 ||||| | || ||| || |||||||| | || | | || | | Sbjct 293623 TGTTGCTA--ATGTAATTTTACATGCACTCTAGGATAGTAAATATTTATATTCTGT-ATA 293567 Query 281 AACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACA 340 | | | || | |||| || || || ||||| |||||||| |||||||||||| Sbjct 293566 GATATG-GTAA--TTGGGATAACAACAGGTCTTCATGGCCCTTATGGGTTGGGCTACACA 293510 Query 341 CGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA 400 |||| |||||||| |||||| | ||||||| |||| | ||||||| | | ||| Sbjct 293509 CGTGTTACAATGGTAGATACAATAAGAAGCGAAAAGGCGACTTGGAGCAAAT-CTAGAAA 293451 Query 401 GTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTA 460 | || |||| | ||||| |||||||||||| |||||| |||||| |||||| Sbjct 293450 ATCTATCCCAGTCCAGATTGCTTTCTGCAACTCGAAAGCATGAAGAAGGAATCACTAGTA 293391 Query 461 ATCGTAGATCAGC-ATGCTACGGTGAATACGTT 492 ||||| |||||| ||| |||||||||||||| Sbjct 293390 ATCGTGAATCAGCAATGTCACGGTGAATACGTT 293358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503927462080