Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq704 280 2e-73 seq2285 262 6e-68 >seq704 Length=136093 Score = 280 bits (310), Expect = 2e-73 Identities = 215/250 (86%), Gaps = 6/250 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 33462 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 33521 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | |||| || | ||||| | |||| | |||||||||||||| | | ||| || | Sbjct 33522 C-TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTAAC-ACCGACAGAA 33578 Query 132 GTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | || || |||||||||||| || |||||||||||||||||||||||||||||| Sbjct 33579 GGCAATCGGTGAACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACA 33638 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 33639 AATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTG 33698 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 33699 TCAATCTGTC 33708 >seq2285 Length=5733 Score = 262 bits (290), Expect = 6e-68 Identities = 217/258 (84%), Gaps = 15/258 (6%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 33 TCCCTCATTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 92 Query 72 CCTCAAACTTCCATTGGCT-GGAA-GCCAATAGTCCCTCTAAGAAGCCAGCC------AC 123 | |||| ||| ||||| |||| |||| | ||||||||||||||| | | || Sbjct 93 C-TCAAT-TTCGCGTGGCTAGGAACGCCACTTGTCCCTCTAAGAAGCAAATCGGGTCAAC 150 Query 124 CAACCATAGTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | || | | ||| | | |||||||||||| || |||||||||||||||||||||| Sbjct 151 CCACAACGG--GATTGCCCGTCTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTA 208 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 209 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGA 268 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| ||| |||||| Sbjct 269 AAGAGCTCTCAGTCTGTC 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796762771263