Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3013 73.4 4e-11 >seq3013 Length=560567 Score = 73.4 bits (80), Expect = 4e-11 Identities = 100/144 (69%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||| ||||||||| | | |||| | || |||| | ||| || | | ||||||||| || Sbjct 281595 GGGACTTTTCGTCTAACCACGGGAACTCCGCATTTGCACGGAGAATTAAATTTCACTAAG 281654 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | | | |||||| || ||||||| |||||||| | ||| || Sbjct 281655 TTGATGTTAAAGACAGCGAGACAGTCGTTAAACCATTCATGCAGGTCACCAATTATGTGA 281714 Query 145 CAAGGAATTTCGCTACCTTAGGAC 168 ||| |||||||||||||||||||| Sbjct 281715 CAATGAATTTCGCTACCTTAGGAC 281738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547174433277