Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3013 132 1e-28 >seq3013 Length=560567 Score = 132 bits (146), Expect = 1e-28 Identities = 143/188 (76%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| || |||| |||||||| | |||| | |||||||||||||||| ||||||||| || Sbjct 294316 CACGTGGTATTG-CTGGATCACGGTTTCCCGCATTGTCCAATATTCCTCACTGCTGCTTC 294374 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||| | || || ||| || | || ||| |||||| || ||| ||| | || || | Sbjct 294375 CCGCAAGAAGCTAGACTGTATTCCAATTCTAGTGTGGCTATTCACCCTTTAAGGATAGCT 294434 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 | |||| | | ||||||| ||||||||| ||||||||| |||||| | || |||||| Sbjct 294435 ATAGATCATAGACTTGGTGCGCCATTACCACACCAACTATCTAATCTAAAATAAGCTCAT 294494 Query 209 CTGATAGC 216 || || || Sbjct 294495 CTTATGGC 294502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071948297440