Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3013 87.8 7e-15 >seq3013 Length=560567 Score = 87.8 bits (96), Expect = 7e-15 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 ||||| |||||||| ||||| ||||||||||||| ||||||| || |||||| Sbjct 282693 GACGCATTACCTAAATAATTTTCGCAGAGAACCAGCTATATGTAAGTTTGTTTAGCCTTT 282752 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCA-CG 252 ||| ||||| |||| |||||||| || |||| ||||||||||||||| Sbjct 282753 CACTCCTATTCACAAGTCATCCCAGATTATTGCAACAATCACGGGTTCGGTCCTCCATTT 282812 Query 253 CGGTCTTA-CCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT 306 | | ||| | ||||||||||| ||| |||| |||||| ||||||||| Sbjct 282813 AGATATTATCTAATACTTCAACCTGCTCATAAATAGCTCACTTACTTTCGGGTCT 282867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817512337152