Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq704 100 3e-19 seq2285 84.2 3e-14 >seq704 Length=136093 Score = 100 bits (110), Expect = 3e-19 Identities = 143/191 (75%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC- 68 ||||||||||||||| || | ||||||||| |||||||||||| ||||| ||| Sbjct 34101 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCGCGATTATTCAGGCA 34159 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA-CA 127 || ||||||||||| |||||||||||| |||| ||||| || | || | ||| | || Sbjct 34160 GTCCGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGTTCCGG-CCACCCGAAGCA 34218 Query 128 C-CAATGAAG-GCA-TACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCG 184 | ||| |||| ||| | ||| ||| |||||||| | || |||||| |||||| Sbjct 34219 CTCAACGAAGAGCACCAAGGGAAAACCGGGAGGTAGGTC-AGGACGGGCAGTAATCGCCG 34277 Query 185 TGAGGCGGACC 195 |||||| ||| Sbjct 34278 CGAGGCGAACC 34288 >seq2285 Length=5733 Score = 84.2 bits (92), Expect = 3e-14 Identities = 85/109 (78%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||||||||||||||||| | |||||| || Sbjct 678 AAACCAACAAAATAGATCCG-AGGTCCTATTCTATTATTCCATGCAACAGTATTCAAGCA 736 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 || || |||||| | |||||||||||| ||| ||||| | |||| Sbjct 737 CAAACGGCTTGCTTTAAGCACTCTAATTTTTTCAGAGTAAACTTTCTGG 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595172190582