Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3013 96.9 3e-18 >seq3013 Length=560567 Score = 96.9 bits (106), Expect = 3e-18 Identities = 106/140 (76%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||| ||||| |||| | ||||| | ||| ||||| |||| Sbjct 293416 TCGAGTTGCAGAAAGCAATCTGGACTGGGATAGATTTTCTAG-ATTTGCTCCAAGTCGCC 293474 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || || | ||||| |||||||||| ||||||| ||||| |||||||||||||| Sbjct 293475 TTTTCGCTTCTTATTGTATCTACCATTGTAACACGTGTGTAGCCCAACCCATAAGGGCCA 293534 Query 121 TGAGGACTTGACGTCATCCC 140 ||| ||| || || ||||| Sbjct 293535 TGAAGACCTGTTGTTATCCC 293554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415980563310