Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq704 127 2e-27 seq2285 122 9e-26 >seq704 Length=136093 Score = 127 bits (140), Expect = 2e-27 Identities = 141/180 (78%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT-TGCTCGAATACATTAC-C 67 || ||||||||||||||||||||| | ||||||||||| ||| ||||| || | | Sbjct 34201 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGGACTGCCTGAATA-ATCGCGC 34143 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAA 126 |||||||||| ||||||||| | |||||||||||||| ||||| | ||| | | | ||| Sbjct 34142 ATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCGAGGTAA 34085 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| || | ||| || |||||| | ||||| ||| | ||||||||||||||||| Sbjct 34084 TGATTAAGAGGGACAGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 34025 >seq2285 Length=5733 Score = 122 bits (134), Expect = 9e-26 Identities = 140/185 (76%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT---GCTCGAATAC 61 |||| | |||||| |||||||||||||| | | |||||| ||| || ||| |||||| Sbjct 785 CCAGAAAGTTTACTCTGAAAAAATTAGAGTGCTTAAAGCAAGCCGTTTGTGCTTGAATAC 726 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 | ||||||||||||||||||||| | ||| |||||||||| ||||| | ||| Sbjct 725 TGTTGCATGGAATAATAGAATAGGACCT-CGGATCTATTTTGTTGGTTT-TCGGAGTCGA 668 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| || | ||| || |||||| | ||||| || | |||||||||||| Sbjct 667 GGTAATGATTAAGAGGGACAGACGGGGGCATTCGTATTGCGCCGTTAGAGGTGAAATTCT 608 Query 182 TGGAT 186 ||||| Sbjct 607 TGGAT 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511976077920