Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq3013 150 5e-34 >seq3013 Length=560567 Score = 150 bits (166), Expect = 5e-34 Identities = 237/336 (71%), Gaps = 5/336 (1%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| |||||||| ||||| ||| |||||| | | |||| |||| ||| | || Sbjct 294480 GATTAGATAGTTGGTGTGGTAATGGCGCACCAAGTCTATGATCTATAGCTATCCTTAAAG 294421 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 ||||| |||||| | ||| || | || ||| | || | ||||| ||||||||| | Sbjct 294420 GGTGAATAGCCACACTAGAATTGGAATACAGTCTAGCTTCTTGCGGGAAGCAGCAGTGAG 294361 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| |||||| | ||| | |||| |||||| || ||||| ||||||||| || Sbjct 294360 GAATATTGGACAATGCGGGAAACCGTGATCCAGCAATACCACGTGAATGATGAAGGCATT 294301 Query 347 CGG--GTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCC 404 |||||||| ||| | | | | ||| ||| || | | || |||| || Sbjct 294300 AATTTGTCGTAAAATTCTTTTATAATACAGAATACTGATCATATT--ATGAATAAGCGCC 294243 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 ||| ||| ||||||||| ||||||||| || ||| || | ||||| ||| | | Sbjct 294242 GGCCAACCTTGTGCCAGCAACCGCGGTAAGACAAGGGGCGCAAACGTTACTCGGTTTCAA 294183 Query 465 TGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||||||||||||||||| || |||||| Sbjct 294182 TGGGTT-TAAAGGGTGCGTAGGTGTTTGTATAAGTC 294148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497527770752