Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq704 215 1e-53 seq2285 102 2e-19 >seq704 Length=136093 Score = 215 bits (238), Expect = 1e-53 Identities = 207/259 (80%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 33563 CTTCTTAGAGGGACAAGTGGCGTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 33506 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||| ||||||||||||||||||||||| || ||||| || || Sbjct 33505 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGAAGGAATCAACGTGTGT-TCT 33447 Query 191 CCTTGG-CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 || || ||| |||| | |||||| | | || ||| ||||||| ||||| | | || Sbjct 33446 CCCTGATCCGAAAGGACCGGGTAACCCGATGAACCTCCTTCGTGCTAGGGATTGGGGCTT 33387 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||| Sbjct 33386 GCAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 33327 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 33326 TACGTCCCTGCCCTTTGTA 33308 >seq2285 Length=5733 Score = 102 bits (112), Expect = 2e-19 Identities = 124/162 (77%), Gaps = 14/162 (9%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCG--CCG----G 71 || |||||| || |||||||||||| | ||| | | ||| |||| | ||| | Sbjct 195 GAACGAGACTCTAGCCTGCTAAATAGACGGGCAATCCCGTTGT-GGGTTGACCCGATTTG 137 Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||| | ||| | |||| ||| || ||| |||||||||||||| Sbjct 136 CTTCTTAGAGGGACAAGTGGCGTTCCTAGCCACGCGAAATT-GAG-CAATAACAGGTCTG 79 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||| | ||||||||||||||||||| ||| Sbjct 78 TGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACAATGA 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947154316544