Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3013 107 7e-21 >seq3013 Length=560567 Score = 107 bits (118), Expect = 7e-21 Identities = 173/247 (70%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 234 TCATAGTCTCCCACCTATCCTAC--ACAAACCGCACCGAATGCCAATACCAAGCTATAGT 291 ||| ||||||| |||||||| | ||| || || || ||||||| || |||||| Sbjct 281527 TCAAAGTCTCCTCCCTATCCTGCGTACACACATTCCCCAA--CCAATACAAAATTATAGT 281584 Query 292 GAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||||| ||| ||||||||| || || ||| |||| | || | | || Sbjct 281585 AAAGGTATTAGGGACTTTTCGTCTAACCACGGGAACTCCGCATTTGCACGGAGAATTAAA 281644 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGA 411 |||||| | || | ||||||| | |||||||| |||||| |||||||| Sbjct 281645 TTTCACTAAGTTGATGTTAAAGACAGCGAGACAGTCGTTAAACCATTCATGCAGGTCACC 281704 Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 | ||| ||||| ||||||||||||||||||| | ||||||||| | |||||||||| | Sbjct 281705 AATTATGTGACAATGAATTTCGCTACCTTAGGACGATTATAGTTATCGCCGCCGTTTATT 281764 Query 472 GGGGCTT 478 ||||| Sbjct 281765 CTGGCTT 281771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702317893248