Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq3013 78.8 2e-12 >seq3013 Length=560567 Score = 78.8 bits (86), Expect = 2e-12 Identities = 142/207 (69%), Gaps = 7/207 (3%) Strand=Plus/Plus Query 77 TTATAAAAGAAGTTTAC----AATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGT 132 ||||||||||| ||||| ||| || |||||||| |||||| | ||||| Sbjct 294276 TTATAAAAGAATTTTACGACAAAT---TAATGCCTTCATCATTCACGTGGTATTGCTGGA 294332 Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 ||| | || ||||| |||||||||||||||||||| ||||| | || | ||| | Sbjct 294333 TCACGGTTTCCCGCATTGTCCAATATTCCTCACTGCTGCTTCCCGCAAGAAGCTAGACTG 294392 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252 | | || ||| | ||||| | ||| | || | |||| ||| ||| || ||| Sbjct 294393 TATTCCAATTCTAGTGTGGCTATTCACCCTTTAAGGATAGCTATAGATCATAGACTTGGT 294452 Query 253 GGGCCGTTACCCCGCCTACTACCTAAT 279 | ||| ||||| | || |||| ||||| Sbjct 294453 GCGCCATTACCACACCAACTATCTAAT 294479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068748451776