Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq704 102 1e-19 seq2285 100 5e-19 >seq704 Length=136093 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 28741 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 28684 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 28683 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGTCCA 28624 Query 121 GAA 123 ||| Sbjct 28623 GAA 28621 >seq2285 Length=5733 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || | || |||| || || | Sbjct 2818 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGCTGAAAAGCCAAT 2761 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| || |||| |||||||||||||||||||||||| Sbjct 2760 GGTGCGAAGCTACCATCTGGGGGCATATGACTGAACGCCTCTAAGTCAGAATCC 2707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819161724672