Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq194 91.5 7e-17 seq30 91.5 7e-17 seq17 91.5 7e-17 >seq194 Length=1062 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||| Sbjct 399 GGAAAAGAAACCAACGGGGATTCCCATAGTAACGGCGAGTGAAAGGGGAAGAGCCCAGCG 458 Query 61 CCGAATCC 68 |||||||| Sbjct 459 CCGAATCC 466 >seq30 Length=21282 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||| Sbjct 1820 GGAAAAGAAACCAACGGGGATTCCCATAGTAACGGCGAGTGAAAGGGGAAGAGCCCAGCG 1761 Query 61 CCGAATCC 68 |||||||| Sbjct 1760 CCGAATCC 1753 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||| Sbjct 11038 GGAAAAGAAACCAACGGGGATTCCCATAGTAACGGCGAGTGAAAGGGGAAGAGCCCAGCG 10979 Query 61 CCGAATCC 68 |||||||| Sbjct 10978 CCGAATCC 10971 >seq17 Length=777369 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||| Sbjct 771388 GGAAAAGAAACCAACGGGGATTCCCATAGTAACGGCGAGTGAAAGGGGAAGAGCCCAGCG 771447 Query 61 CCGAATCC 68 |||||||| Sbjct 771448 CCGAATCC 771455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230399568000