Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq6160 86.0 9e-15 >seq6160 Length=10982 Score = 86.0 bits (94), Expect = 9e-15 Identities = 171/251 (68%), Gaps = 27/251 (11%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| |||||||| ||| || ||||| || ||||| | || ||| Sbjct 8915 CTTAACCTTCCGGCACTGGGCAGGCATCACCCCCTATACTTCTTCTTAC-GAATTAGCAG 8857 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCT--CTATTCTCTGCGACCACCACCAGCT 118 || || ||||||| |||||||| | ||||| || || |||| ||| | Sbjct 8856 AGAGCTATGTTTTTGTTAAACAGTTG--TCCCTTCCTCTTTTCTGAGAC----------T 8809 Query 119 CAACACGTCGTTCACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || || | ||||| ||||||||||| |||| ||||||| |||||||| Sbjct 8808 CA----------CATTA-CAGTGAGCACCCCTTCTTGCGAACGTACGGGGTCATTTTGCA 8760 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 || ||||||| | | |||| | || ||||||| || ||| | ||| ||| ||||| Sbjct 8759 GAGTTCCTTAGCTATAGTTGTCTCGCTTGCCTTAGGATATTCTCCTTGAACACGTGTGTT 8700 Query 238 GGTTTACGGTA 248 ||| ||||| Sbjct 8699 CGTTCTCGGTA 8689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693249326469