Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq6160 201 3e-49 >seq6160 Length=10982 Score = 201 bits (222), Expect = 3e-49 Identities = 219/294 (74%), Gaps = 19/294 (6%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61 |||| || |||||||||||||| | | |||||||| |||||| | ||||||||| Sbjct 9126 GCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCGAGTCTATAGCCGAGACAGCG 9067 Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121 | ||| ||| || ||||||| |||| ||||||||| |||||||||||||||||||| Sbjct 9066 AAGGGATCATTATACCTTTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCT 9007 Query 122 TAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG------ 175 |||||||||||| ||||||||||||||| ||| ||||||| || |||||| Sbjct 9006 TAGGACCGTTATAGTTACGGCCGCCGTTCACCAGGGCTTCAATTTCCTGCTTCGTTAGAA 8947 Query 176 ----------CGT---TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCA 222 ||| || ||||| | ||||||||||||||| |||||||| ||| Sbjct 8946 AGAATTAAATCGTTAATAACTAACAGGTCCTCTTAACCTTCCGGCACTGGGCAGGCATCA 8887 Query 223 CACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276 | |||||||| || ||| || || |||||| ||| ||||||| |||||||| Sbjct 8886 CCCCCTATACTTCTTCTTACGAATTAGCAGAGAGCTATGTTTTTGTTAAACAGT 8833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258643363776