Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq6160 425 2e-116 >seq6160 Length=10982 Score = 425 bits (470), Expect = 2e-116 Identities = 396/496 (80%), Gaps = 18/496 (4%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6166 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 6225 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAG- 125 |||||||||||||||||||||||||||||| ||||||| | || | | || Sbjct 6226 TAATTCGAAGCAACGCGAAGAACCTTACCAGGGTTTGACATACAGTG------CGAAAGT 6279 Query 126 ATAGAGGTTTCCCCTTCGGGGG---ACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCT 182 |||||| | | || || || ||| | ||||||| ||||||||||||||||||| Sbjct 6280 ATAGAGATATACC----GGAGGTTAACATTGATACAGGTGGTGCATGGTTGTCGTCAGCT 6335 Query 183 CGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA 242 |||| |||||| |||| |||||||||| | ||||||||||||||||| ||| || | Sbjct 6336 CGTGCCGTGAGGTGTTTGGTTAAGTCCAGTAACGAGCGCAACCCTTATCGTTAATTACTC 6395 Query 243 TCATTAAGTTGGGCACTCTAAGTT-GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACG 301 |||||||||| | || || |||||| | | || | |||||||||| ||| | Sbjct 6396 -CATTAAGTTGAGTTACCTTAGCGAGACTGCTAGCGT-AAGCTAGAGGAAGGTGAGGATG 6453 Query 302 ACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACA 361 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 6454 ACGTCAAATCATCATGCCCCTTATGCCCTGGGCTACACACGTGCTACAATGGCCAATACA 6513 Query 362 AAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGT 421 | | || | ||| |||| ||| |||| ||||||| ||||||||||||||| Sbjct 6514 ATCAGTCGCAATCCCGTGAGGAGGAGCTAATCTGTAAAAGTTGGTCTCAGTTCGGATTGA 6573 Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTAC 480 |||||||||||||||| |||||| ||||||||||||||||| | |||||| | | | | Sbjct 6574 AGTCTGCAACTCGACTTCATGAAGTCGGAATCGCTAGTAATCGCAAATCAGCAACGTTGC 6633 Query 481 GGTGAATACGTTCCCG 496 ||||||||||||| || Sbjct 6634 GGTGAATACGTTCTCG 6649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501427362880